data_9J5B # _model_server_result.job_id 7yk1qD8y-nmvz3PsihexjA _model_server_result.datetime_utc '2025-01-04 07:11:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9j5b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 9J5B # _exptl.entry_id 9J5B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.184 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'dimethyl benzene-1,2-dicarboxylate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9J5B _cell.length_a 107.668 _cell.length_b 107.668 _cell.length_c 44.489 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9J5B _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C10 H10 O4' _chem_comp.formula_weight 194.184 _chem_comp.id TIK _chem_comp.mon_nstd_flag . _chem_comp.name 'dimethyl benzene-1,2-dicarboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Dimethyl phthalate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 TIK sing 321 n n O1 C2 TIK sing 322 n n O2 C2 TIK doub 323 n n C2 C3 TIK sing 324 n n C4 C3 TIK doub 325 n y C4 C5 TIK sing 326 n y C3 C8 TIK sing 327 n y C5 C6 TIK doub 328 n y C8 C9 TIK sing 329 n n C8 C7 TIK doub 330 n y C6 C7 TIK sing 331 n y C9 O3 TIK doub 332 n n C9 O4 TIK sing 333 n n C10 O4 TIK sing 334 n n C1 H3 TIK sing 335 n n C1 H1 TIK sing 336 n n C1 H2 TIK sing 337 n n C4 H4 TIK sing 338 n n C5 H5 TIK sing 339 n n C6 H6 TIK sing 340 n n C7 H7 TIK sing 341 n n C10 H10 TIK sing 342 n n C10 H8 TIK sing 343 n n C10 H9 TIK sing 344 n n # _atom_sites.entry_id 9J5B _atom_sites.fract_transf_matrix[1][1] 0.009288 _atom_sites.fract_transf_matrix[1][2] 0.005362 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010725 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TIK A 1 401 401 TIK DMP . C 2 TIK A 1 402 402 TIK DMP . D 3 EDO A 1 403 403 EDO EDO . E 3 EDO A 1 404 406 EDO EDO . F 4 ACE A 1 405 407 ACE ACE . G 3 EDO A 1 406 413 EDO EDO . H 3 EDO A 1 407 416 EDO EDO . I 3 EDO A 1 408 420 EDO EDO . J 3 EDO A 1 409 421 EDO EDO . K 3 EDO A 1 410 422 EDO EDO . L 3 EDO A 1 411 428 EDO EDO . M 3 EDO A 1 412 429 EDO EDO . N 3 EDO A 1 413 432 EDO EDO . O 3 EDO A 1 414 433 EDO EDO . P 3 EDO A 1 415 1 EDO EDO . Q 3 EDO A 1 416 6 EDO EDO . R 3 EDO A 1 417 8 EDO EDO . S 3 EDO A 1 418 9 EDO EDO . T 5 HOH A 1 501 47 HOH HOH . T 5 HOH A 2 502 189 HOH HOH . T 5 HOH A 3 503 145 HOH HOH . T 5 HOH A 4 504 193 HOH HOH . T 5 HOH A 5 505 10 HOH HOH . T 5 HOH A 6 506 107 HOH HOH . T 5 HOH A 7 507 9 HOH HOH . T 5 HOH A 8 508 113 HOH HOH . T 5 HOH A 9 509 124 HOH HOH . T 5 HOH A 10 510 190 HOH HOH . T 5 HOH A 11 511 209 HOH HOH . T 5 HOH A 12 512 85 HOH HOH . T 5 HOH A 13 513 75 HOH HOH . T 5 HOH A 14 514 6 HOH HOH . T 5 HOH A 15 515 27 HOH HOH . T 5 HOH A 16 516 45 HOH HOH . T 5 HOH A 17 517 42 HOH HOH . T 5 HOH A 18 518 25 HOH HOH . T 5 HOH A 19 519 211 HOH HOH . T 5 HOH A 20 520 222 HOH HOH . T 5 HOH A 21 521 48 HOH HOH . T 5 HOH A 22 522 13 HOH HOH . T 5 HOH A 23 523 23 HOH HOH . T 5 HOH A 24 524 14 HOH HOH . T 5 HOH A 25 525 200 HOH HOH . T 5 HOH A 26 526 182 HOH HOH . T 5 HOH A 27 527 89 HOH HOH . T 5 HOH A 28 528 70 HOH HOH . T 5 HOH A 29 529 43 HOH HOH . T 5 HOH A 30 530 32 HOH HOH . T 5 HOH A 31 531 18 HOH HOH . T 5 HOH A 32 532 221 HOH HOH . T 5 HOH A 33 533 50 HOH HOH . T 5 HOH A 34 534 39 HOH HOH . T 5 HOH A 35 535 81 HOH HOH . T 5 HOH A 36 536 31 HOH HOH . T 5 HOH A 37 537 80 HOH HOH . T 5 HOH A 38 538 104 HOH HOH . T 5 HOH A 39 539 120 HOH HOH . T 5 HOH A 40 540 141 HOH HOH . T 5 HOH A 41 541 36 HOH HOH . T 5 HOH A 42 542 148 HOH HOH . T 5 HOH A 43 543 144 HOH HOH . T 5 HOH A 44 544 91 HOH HOH . T 5 HOH A 45 545 12 HOH HOH . T 5 HOH A 46 546 38 HOH HOH . T 5 HOH A 47 547 73 HOH HOH . T 5 HOH A 48 548 49 HOH HOH . T 5 HOH A 49 549 109 HOH HOH . T 5 HOH A 50 550 152 HOH HOH . T 5 HOH A 51 551 62 HOH HOH . T 5 HOH A 52 552 192 HOH HOH . T 5 HOH A 53 553 11 HOH HOH . T 5 HOH A 54 554 121 HOH HOH . T 5 HOH A 55 555 169 HOH HOH . T 5 HOH A 56 556 159 HOH HOH . T 5 HOH A 57 557 72 HOH HOH . T 5 HOH A 58 558 33 HOH HOH . T 5 HOH A 59 559 57 HOH HOH . T 5 HOH A 60 560 146 HOH HOH . T 5 HOH A 61 561 35 HOH HOH . T 5 HOH A 62 562 97 HOH HOH . T 5 HOH A 63 563 16 HOH HOH . T 5 HOH A 64 564 52 HOH HOH . T 5 HOH A 65 565 69 HOH HOH . T 5 HOH A 66 566 176 HOH HOH . T 5 HOH A 67 567 154 HOH HOH . T 5 HOH A 68 568 22 HOH HOH . T 5 HOH A 69 569 167 HOH HOH . T 5 HOH A 70 570 58 HOH HOH . T 5 HOH A 71 571 46 HOH HOH . T 5 HOH A 72 572 51 HOH HOH . T 5 HOH A 73 573 96 HOH HOH . T 5 HOH A 74 574 137 HOH HOH . T 5 HOH A 75 575 53 HOH HOH . T 5 HOH A 76 576 83 HOH HOH . T 5 HOH A 77 577 86 HOH HOH . T 5 HOH A 78 578 24 HOH HOH . T 5 HOH A 79 579 118 HOH HOH . T 5 HOH A 80 580 55 HOH HOH . T 5 HOH A 81 581 181 HOH HOH . T 5 HOH A 82 582 158 HOH HOH . T 5 HOH A 83 583 56 HOH HOH . T 5 HOH A 84 584 7 HOH HOH . T 5 HOH A 85 585 87 HOH HOH . T 5 HOH A 86 586 108 HOH HOH . T 5 HOH A 87 587 71 HOH HOH . T 5 HOH A 88 588 4 HOH HOH . T 5 HOH A 89 589 44 HOH HOH . T 5 HOH A 90 590 66 HOH HOH . T 5 HOH A 91 591 59 HOH HOH . T 5 HOH A 92 592 95 HOH HOH . T 5 HOH A 93 593 77 HOH HOH . T 5 HOH A 94 594 135 HOH HOH . T 5 HOH A 95 595 138 HOH HOH . T 5 HOH A 96 596 37 HOH HOH . T 5 HOH A 97 597 94 HOH HOH . T 5 HOH A 98 598 111 HOH HOH . T 5 HOH A 99 599 8 HOH HOH . T 5 HOH A 100 600 136 HOH HOH . T 5 HOH A 101 601 149 HOH HOH . T 5 HOH A 102 602 201 HOH HOH . T 5 HOH A 103 603 76 HOH HOH . T 5 HOH A 104 604 117 HOH HOH . T 5 HOH A 105 605 90 HOH HOH . T 5 HOH A 106 606 17 HOH HOH . T 5 HOH A 107 607 185 HOH HOH . T 5 HOH A 108 608 26 HOH HOH . T 5 HOH A 109 609 210 HOH HOH . T 5 HOH A 110 610 216 HOH HOH . T 5 HOH A 111 611 92 HOH HOH . T 5 HOH A 112 612 30 HOH HOH . T 5 HOH A 113 613 21 HOH HOH . T 5 HOH A 114 614 142 HOH HOH . T 5 HOH A 115 615 123 HOH HOH . T 5 HOH A 116 616 204 HOH HOH . T 5 HOH A 117 617 98 HOH HOH . T 5 HOH A 118 618 196 HOH HOH . T 5 HOH A 119 619 131 HOH HOH . T 5 HOH A 120 620 199 HOH HOH . T 5 HOH A 121 621 133 HOH HOH . T 5 HOH A 122 622 180 HOH HOH . T 5 HOH A 123 623 54 HOH HOH . T 5 HOH A 124 624 84 HOH HOH . T 5 HOH A 125 625 102 HOH HOH . T 5 HOH A 126 626 34 HOH HOH . T 5 HOH A 127 627 208 HOH HOH . T 5 HOH A 128 628 29 HOH HOH . T 5 HOH A 129 629 168 HOH HOH . T 5 HOH A 130 630 105 HOH HOH . T 5 HOH A 131 631 151 HOH HOH . T 5 HOH A 132 632 207 HOH HOH . T 5 HOH A 133 633 173 HOH HOH . T 5 HOH A 134 634 194 HOH HOH . T 5 HOH A 135 635 203 HOH HOH . T 5 HOH A 136 636 195 HOH HOH . T 5 HOH A 137 637 127 HOH HOH . T 5 HOH A 138 638 106 HOH HOH . T 5 HOH A 139 639 217 HOH HOH . T 5 HOH A 140 640 60 HOH HOH . T 5 HOH A 141 641 218 HOH HOH . T 5 HOH A 142 642 183 HOH HOH . T 5 HOH A 143 643 165 HOH HOH . T 5 HOH A 144 644 166 HOH HOH . T 5 HOH A 145 645 179 HOH HOH . T 5 HOH A 146 646 213 HOH HOH . T 5 HOH A 147 647 122 HOH HOH . T 5 HOH A 148 648 112 HOH HOH . T 5 HOH A 149 649 157 HOH HOH . T 5 HOH A 150 650 147 HOH HOH . T 5 HOH A 151 651 191 HOH HOH . T 5 HOH A 152 652 212 HOH HOH . T 5 HOH A 153 653 202 HOH HOH . T 5 HOH A 154 654 172 HOH HOH . T 5 HOH A 155 655 103 HOH HOH . T 5 HOH A 156 656 164 HOH HOH . T 5 HOH A 157 657 125 HOH HOH . T 5 HOH A 158 658 219 HOH HOH . T 5 HOH A 159 659 206 HOH HOH . T 5 HOH A 160 660 223 HOH HOH . T 5 HOH A 161 661 215 HOH HOH . T 5 HOH A 162 662 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TIK . . . C 2 20.347 21.929 -26.777 1 26.95 0 C1 TIK 402 A 1 HETATM 2 C C3 TIK . . . C 2 21.881 21.196 -24.317 1 10.92 0 C3 TIK 402 A 1 HETATM 3 C C4 TIK . . . C 2 23.177 20.767 -24.605 1 10.29 0 C4 TIK 402 A 1 HETATM 4 C C5 TIK . . . C 2 24.279 21.312 -23.967 1 10.75 0 C5 TIK 402 A 1 HETATM 5 C C6 TIK . . . C 2 24.104 22.326 -23.044 1 11.63 0 C6 TIK 402 A 1 HETATM 6 O O1 TIK . . . C 2 19.873 21.384 -25.525 1 14.64 0 O1 TIK 402 A 1 HETATM 7 O O4 TIK . . . C 2 19.442 21.817 -22.754 1 17.87 0 O4 TIK 402 A 1 HETATM 8 C C2 TIK . . . C 2 20.73 20.521 -25.011 1 11.44 0 C2 TIK 402 A 1 HETATM 9 O O2 TIK . . . C 2 20.55 19.333 -25.076 1 15.29 0 O2 TIK 402 A 1 HETATM 10 C C7 TIK . . . C 2 22.827 22.76 -22.732 1 13.48 0 C7 TIK 402 A 1 HETATM 11 C C8 TIK . . . C 2 21.7 22.208 -23.351 1 12.79 0 C8 TIK 402 A 1 HETATM 12 C C9 TIK . . . C 2 20.361 22.771 -22.962 1 17.42 0 C9 TIK 402 A 1 HETATM 13 O O3 TIK . . . C 2 20.127 23.955 -22.881 1 23.49 0 O3 TIK 402 A 1 HETATM 14 C C10 TIK . . . C 2 18.05 22.229 -22.771 1 23.92 0 C10 TIK 402 A 1 HETATM 15 H H3 TIK . . . C 2 19.613 22.354 -27.243 1 22.47 0 H3 TIK 402 A 1 HETATM 16 H H1 TIK . . . C 2 20.695 21.21 -27.325 1 22.33 0 H1 TIK 402 A 1 HETATM 17 H H2 TIK . . . C 2 21.05 22.573 -26.607 1 22.09 0 H2 TIK 402 A 1 HETATM 18 H H4 TIK . . . C 2 23.302 20.074 -25.23 1 10.31 0 H4 TIK 402 A 1 HETATM 19 H H5 TIK . . . C 2 25.147 21.014 -24.184 1 10.77 0 H5 TIK 402 A 1 HETATM 20 H H6 TIK . . . C 2 24.851 22.708 -22.614 1 11.41 0 H6 TIK 402 A 1 HETATM 21 H H7 TIK . . . C 2 22.712 23.447 -22.102 1 12.67 0 H7 TIK 402 A 1 HETATM 22 H H10 TIK . . . C 2 17.482 21.446 -22.699 1 22.91 0 H10 TIK 402 A 1 HETATM 23 H H8 TIK . . . C 2 17.86 22.691 -23.603 1 22.36 0 H8 TIK 402 A 1 HETATM 24 H H9 TIK . . . C 2 17.88 22.822 -22.023 1 22.59 0 H9 TIK 402 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 231 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #