data_9J9Q # _model_server_result.job_id 9v7laPkp1XHA0DzZ_dEVzA _model_server_result.datetime_utc '2025-09-06 11:17:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9j9q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 9J9Q # _exptl.entry_id 9J9Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.87 _cell.angle_beta 100.39 _cell.angle_gamma 112.11 _cell.entry_id 9J9Q _cell.length_a 42.467 _cell.length_b 52.25 _cell.length_c 55.88 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9J9Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_656 x+1,y,z+1 1 0 0 0 1 0 0 0 1 32.389183 -15.468584 52.742155 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 52 A HIS 54 1_555 C CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc2 A ND1 HIS 128 A HIS 130 1_555 C CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc3 B ND1 HIS 52 B HIS 54 1_555 D CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc4 B NH2 ARG 77 B ARG 79 1_555 D CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc5 B ND1 HIS 128 B HIS 130 1_555 D CU CU . B CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9J9Q _atom_sites.fract_transf_matrix[1][1] 0.023548 _atom_sites.fract_transf_matrix[1][2] 0.009566 _atom_sites.fract_transf_matrix[1][3] 0.007305 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020658 _atom_sites.fract_transf_matrix[2][3] 0.006057 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01896 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU A 1 201 1 CU CU . D 2 CU B 1 201 2 CU CU . E 3 HOH A 1 301 60 HOH HOH . E 3 HOH A 2 302 57 HOH HOH . E 3 HOH A 3 303 99 HOH HOH . E 3 HOH A 4 304 55 HOH HOH . E 3 HOH A 5 305 87 HOH HOH . E 3 HOH A 6 306 37 HOH HOH . E 3 HOH A 7 307 32 HOH HOH . E 3 HOH A 8 308 103 HOH HOH . E 3 HOH A 9 309 46 HOH HOH . E 3 HOH A 10 310 62 HOH HOH . E 3 HOH A 11 311 64 HOH HOH . E 3 HOH A 12 312 26 HOH HOH . E 3 HOH A 13 313 82 HOH HOH . E 3 HOH A 14 314 102 HOH HOH . E 3 HOH A 15 315 51 HOH HOH . E 3 HOH A 16 316 85 HOH HOH . E 3 HOH A 17 317 91 HOH HOH . E 3 HOH A 18 318 20 HOH HOH . E 3 HOH A 19 319 58 HOH HOH . E 3 HOH A 20 320 96 HOH HOH . E 3 HOH A 21 321 31 HOH HOH . E 3 HOH A 22 322 42 HOH HOH . E 3 HOH A 23 323 74 HOH HOH . E 3 HOH A 24 324 100 HOH HOH . E 3 HOH A 25 325 54 HOH HOH . E 3 HOH A 26 326 38 HOH HOH . E 3 HOH A 27 327 9 HOH HOH . E 3 HOH A 28 328 39 HOH HOH . E 3 HOH A 29 329 29 HOH HOH . E 3 HOH A 30 330 24 HOH HOH . E 3 HOH A 31 331 65 HOH HOH . E 3 HOH A 32 332 7 HOH HOH . E 3 HOH A 33 333 2 HOH HOH . E 3 HOH A 34 334 78 HOH HOH . E 3 HOH A 35 335 108 HOH HOH . E 3 HOH A 36 336 59 HOH HOH . E 3 HOH A 37 337 33 HOH HOH . E 3 HOH A 38 338 95 HOH HOH . E 3 HOH A 39 339 45 HOH HOH . E 3 HOH A 40 340 19 HOH HOH . E 3 HOH A 41 341 18 HOH HOH . E 3 HOH A 42 342 4 HOH HOH . E 3 HOH A 43 343 86 HOH HOH . E 3 HOH A 44 344 75 HOH HOH . E 3 HOH A 45 345 25 HOH HOH . E 3 HOH A 46 346 16 HOH HOH . E 3 HOH A 47 347 41 HOH HOH . E 3 HOH A 48 348 48 HOH HOH . E 3 HOH A 49 349 81 HOH HOH . E 3 HOH A 50 350 52 HOH HOH . E 3 HOH A 51 351 114 HOH HOH . E 3 HOH A 52 352 77 HOH HOH . E 3 HOH A 53 353 109 HOH HOH . E 3 HOH A 54 354 47 HOH HOH . E 3 HOH A 55 355 112 HOH HOH . E 3 HOH A 56 356 119 HOH HOH . E 3 HOH A 57 357 111 HOH HOH . E 3 HOH A 58 358 50 HOH HOH . F 3 HOH B 1 301 53 HOH HOH . F 3 HOH B 2 302 92 HOH HOH . F 3 HOH B 3 303 69 HOH HOH . F 3 HOH B 4 304 88 HOH HOH . F 3 HOH B 5 305 70 HOH HOH . F 3 HOH B 6 306 73 HOH HOH . F 3 HOH B 7 307 23 HOH HOH . F 3 HOH B 8 308 68 HOH HOH . F 3 HOH B 9 309 35 HOH HOH . F 3 HOH B 10 310 67 HOH HOH . F 3 HOH B 11 311 17 HOH HOH . F 3 HOH B 12 312 93 HOH HOH . F 3 HOH B 13 313 84 HOH HOH . F 3 HOH B 14 314 43 HOH HOH . F 3 HOH B 15 315 56 HOH HOH . F 3 HOH B 16 316 61 HOH HOH . F 3 HOH B 17 317 79 HOH HOH . F 3 HOH B 18 318 13 HOH HOH . F 3 HOH B 19 319 90 HOH HOH . F 3 HOH B 20 320 1 HOH HOH . F 3 HOH B 21 321 98 HOH HOH . F 3 HOH B 22 322 30 HOH HOH . F 3 HOH B 23 323 71 HOH HOH . F 3 HOH B 24 324 28 HOH HOH . F 3 HOH B 25 325 22 HOH HOH . F 3 HOH B 26 326 36 HOH HOH . F 3 HOH B 27 327 63 HOH HOH . F 3 HOH B 28 328 14 HOH HOH . F 3 HOH B 29 329 12 HOH HOH . F 3 HOH B 30 330 21 HOH HOH . F 3 HOH B 31 331 94 HOH HOH . F 3 HOH B 32 332 6 HOH HOH . F 3 HOH B 33 333 15 HOH HOH . F 3 HOH B 34 334 27 HOH HOH . F 3 HOH B 35 335 72 HOH HOH . F 3 HOH B 36 336 10 HOH HOH . F 3 HOH B 37 337 44 HOH HOH . F 3 HOH B 38 338 49 HOH HOH . F 3 HOH B 39 339 3 HOH HOH . F 3 HOH B 40 340 5 HOH HOH . F 3 HOH B 41 341 11 HOH HOH . F 3 HOH B 42 342 89 HOH HOH . F 3 HOH B 43 343 34 HOH HOH . F 3 HOH B 44 344 40 HOH HOH . F 3 HOH B 45 345 8 HOH HOH . F 3 HOH B 46 346 66 HOH HOH . F 3 HOH B 47 347 107 HOH HOH . F 3 HOH B 48 348 106 HOH HOH . F 3 HOH B 49 349 110 HOH HOH . F 3 HOH B 50 350 76 HOH HOH . F 3 HOH B 51 351 113 HOH HOH . F 3 HOH B 52 352 80 HOH HOH . F 3 HOH B 53 353 83 HOH HOH . F 3 HOH B 54 354 101 HOH HOH . F 3 HOH B 55 355 116 HOH HOH . F 3 HOH B 56 356 97 HOH HOH . F 3 HOH B 57 357 118 HOH HOH . F 3 HOH B 58 358 115 HOH HOH . F 3 HOH B 59 359 105 HOH HOH . F 3 HOH B 60 360 117 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -33.297 _atom_site.Cartn_y 27.347 _atom_site.Cartn_z -34.181 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 65.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 411 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #