data_9JHV # _model_server_result.job_id dInKh9YmF37oaWNNzrxwlg _model_server_result.datetime_utc '2024-11-21 23:31:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9jhv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 9JHV # _exptl.entry_id 9JHV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9JHV _cell.length_a 78.854 _cell.length_b 78.854 _cell.length_c 233.369 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9JHV _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_445 -y-1,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -39.427 -68.289567 0 3 'crystal symmetry operation' 3_545 -x+y,-x-1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 39.427 -68.289567 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 143 A CYS 143 1_555 A SG CYS 210 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 205 A CYS 205 1_555 A SG CYS 266 A CYS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 264 A CYS 264 1_555 A SG CYS 267 A CYS 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 274 n n C1 C2 PEG sing 275 n n C1 H11 PEG sing 276 n n C1 H12 PEG sing 277 n n O1 HO1 PEG sing 278 n n C2 O2 PEG sing 279 n n C2 H21 PEG sing 280 n n C2 H22 PEG sing 281 n n O2 C3 PEG sing 282 n n C3 C4 PEG sing 283 n n C3 H31 PEG sing 284 n n C3 H32 PEG sing 285 n n C4 O4 PEG sing 286 n n C4 H41 PEG sing 287 n n C4 H42 PEG sing 288 n n O4 HO4 PEG sing 289 n n # _atom_sites.entry_id 9JHV _atom_sites.fract_transf_matrix[1][1] 0.012682 _atom_sites.fract_transf_matrix[1][2] 0.007322 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004285 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PEG A 1 301 301 PEG PEG . C 3 PO4 A 1 302 400 PO4 PO4 . D 4 MTA A 1 303 401 MTA MTA . E 5 HOH A 1 401 44 HOH HOH . E 5 HOH A 2 402 51 HOH HOH . E 5 HOH A 3 403 45 HOH HOH . E 5 HOH A 4 404 28 HOH HOH . E 5 HOH A 5 405 22 HOH HOH . E 5 HOH A 6 406 38 HOH HOH . E 5 HOH A 7 407 25 HOH HOH . E 5 HOH A 8 408 32 HOH HOH . E 5 HOH A 9 409 50 HOH HOH . E 5 HOH A 10 410 8 HOH HOH . E 5 HOH A 11 411 31 HOH HOH . E 5 HOH A 12 412 55 HOH HOH . E 5 HOH A 13 413 27 HOH HOH . E 5 HOH A 14 414 48 HOH HOH . E 5 HOH A 15 415 39 HOH HOH . E 5 HOH A 16 416 21 HOH HOH . E 5 HOH A 17 417 6 HOH HOH . E 5 HOH A 18 418 40 HOH HOH . E 5 HOH A 19 419 16 HOH HOH . E 5 HOH A 20 420 34 HOH HOH . E 5 HOH A 21 421 30 HOH HOH . E 5 HOH A 22 422 15 HOH HOH . E 5 HOH A 23 423 54 HOH HOH . E 5 HOH A 24 424 5 HOH HOH . E 5 HOH A 25 425 33 HOH HOH . E 5 HOH A 26 426 18 HOH HOH . E 5 HOH A 27 427 11 HOH HOH . E 5 HOH A 28 428 2 HOH HOH . E 5 HOH A 29 429 9 HOH HOH . E 5 HOH A 30 430 52 HOH HOH . E 5 HOH A 31 431 53 HOH HOH . E 5 HOH A 32 432 24 HOH HOH . E 5 HOH A 33 433 17 HOH HOH . E 5 HOH A 34 434 10 HOH HOH . E 5 HOH A 35 435 20 HOH HOH . E 5 HOH A 36 436 46 HOH HOH . E 5 HOH A 37 437 19 HOH HOH . E 5 HOH A 38 438 47 HOH HOH . E 5 HOH A 39 439 12 HOH HOH . E 5 HOH A 40 440 35 HOH HOH . E 5 HOH A 41 441 3 HOH HOH . E 5 HOH A 42 442 4 HOH HOH . E 5 HOH A 43 443 43 HOH HOH . E 5 HOH A 44 444 1 HOH HOH . E 5 HOH A 45 445 37 HOH HOH . E 5 HOH A 46 446 41 HOH HOH . E 5 HOH A 47 447 14 HOH HOH . E 5 HOH A 48 448 7 HOH HOH . E 5 HOH A 49 449 13 HOH HOH . E 5 HOH A 50 450 26 HOH HOH . E 5 HOH A 51 451 36 HOH HOH . E 5 HOH A 52 452 29 HOH HOH . E 5 HOH A 53 453 23 HOH HOH . E 5 HOH A 54 454 49 HOH HOH . E 5 HOH A 55 455 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . B 2 -1.062 -43.788 -17.858 1 41.69 ? C1 PEG 301 A 1 HETATM 2 O O1 PEG . . . B 2 -0.059 -44.62 -18.372 1 51.46 ? O1 PEG 301 A 1 HETATM 3 C C2 PEG . . . B 2 -0.513 -42.628 -17.124 1 44.62 ? C2 PEG 301 A 1 HETATM 4 O O2 PEG . . . B 2 -1.357 -41.507 -17.392 1 43.83 ? O2 PEG 301 A 1 HETATM 5 C C3 PEG . . . B 2 -1.034 -40.324 -16.672 1 45.84 ? C3 PEG 301 A 1 HETATM 6 C C4 PEG . . . B 2 -1.056 -39.1 -17.564 1 43.33 ? C4 PEG 301 A 1 HETATM 7 O O4 PEG . . . B 2 0.249 -38.748 -18.113 1 24.45 ? O4 PEG 301 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #