data_9JQ0 # _model_server_result.job_id UsD6gWfnZpRDaB58O5KDaw _model_server_result.datetime_utc '2024-11-28 05:29:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9jq0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 9JQ0 # _exptl.entry_id 9JQ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9JQ0 _cell.length_a 124.71 _cell.length_b 124.71 _cell.length_c 97.28 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9JQ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L 1 1,2,3,4,5,6 A,B,C,D,E,F,G,H,I,J,K,L 2 1,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 62.355 -108.002028 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 124.71 0 0 4 'crystal symmetry operation' 10_554 -y,-x,-z-1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 -48.64 5 'crystal symmetry operation' 11_654 -x+y+1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 124.71 0 -48.64 6 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 62.355 -108.002028 -48.64 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 132 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 132 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 186 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 186 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.048 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 273 n n P O2 PO4 sing 274 n n P O3 PO4 sing 275 n n P O4 PO4 sing 276 n n # _atom_sites.entry_id 9JQ0 _atom_sites.fract_transf_matrix[1][1] 0.008019 _atom_sites.fract_transf_matrix[1][2] 0.00463 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009259 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01028 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 301 1 PO4 PO4 . C 2 PO4 A 1 302 2 PO4 PO4 . D 2 PO4 A 1 303 3 PO4 PO4 . E 2 PO4 A 1 304 4 PO4 PO4 . F 2 PO4 A 1 305 5 PO4 PO4 . G 2 PO4 A 1 306 6 PO4 PO4 . H 2 PO4 A 1 307 7 PO4 PO4 . I 3 GOL A 1 308 1 GOL GOL . J 3 GOL A 1 309 2 GOL GOL . K 3 GOL A 1 310 3 GOL GOL . L 4 HOH A 1 401 102 HOH HOH . L 4 HOH A 2 402 41 HOH HOH . L 4 HOH A 3 403 35 HOH HOH . L 4 HOH A 4 404 40 HOH HOH . L 4 HOH A 5 405 22 HOH HOH . L 4 HOH A 6 406 13 HOH HOH . L 4 HOH A 7 407 31 HOH HOH . L 4 HOH A 8 408 30 HOH HOH . L 4 HOH A 9 409 74 HOH HOH . L 4 HOH A 10 410 4 HOH HOH . L 4 HOH A 11 411 61 HOH HOH . L 4 HOH A 12 412 2 HOH HOH . L 4 HOH A 13 413 134 HOH HOH . L 4 HOH A 14 414 29 HOH HOH . L 4 HOH A 15 415 49 HOH HOH . L 4 HOH A 16 416 79 HOH HOH . L 4 HOH A 17 417 98 HOH HOH . L 4 HOH A 18 418 60 HOH HOH . L 4 HOH A 19 419 115 HOH HOH . L 4 HOH A 20 420 123 HOH HOH . L 4 HOH A 21 421 59 HOH HOH . L 4 HOH A 22 422 125 HOH HOH . L 4 HOH A 23 423 94 HOH HOH . L 4 HOH A 24 424 92 HOH HOH . L 4 HOH A 25 425 69 HOH HOH . L 4 HOH A 26 426 17 HOH HOH . L 4 HOH A 27 427 57 HOH HOH . L 4 HOH A 28 428 71 HOH HOH . L 4 HOH A 29 429 114 HOH HOH . L 4 HOH A 30 430 129 HOH HOH . L 4 HOH A 31 431 101 HOH HOH . L 4 HOH A 32 432 95 HOH HOH . L 4 HOH A 33 433 51 HOH HOH . L 4 HOH A 34 434 16 HOH HOH . L 4 HOH A 35 435 67 HOH HOH . L 4 HOH A 36 436 68 HOH HOH . L 4 HOH A 37 437 9 HOH HOH . L 4 HOH A 38 438 34 HOH HOH . L 4 HOH A 39 439 73 HOH HOH . L 4 HOH A 40 440 15 HOH HOH . L 4 HOH A 41 441 26 HOH HOH . L 4 HOH A 42 442 20 HOH HOH . L 4 HOH A 43 443 14 HOH HOH . L 4 HOH A 44 444 80 HOH HOH . L 4 HOH A 45 445 5 HOH HOH . L 4 HOH A 46 446 77 HOH HOH . L 4 HOH A 47 447 63 HOH HOH . L 4 HOH A 48 448 38 HOH HOH . L 4 HOH A 49 449 10 HOH HOH . L 4 HOH A 50 450 46 HOH HOH . L 4 HOH A 51 451 21 HOH HOH . L 4 HOH A 52 452 1 HOH HOH . L 4 HOH A 53 453 48 HOH HOH . L 4 HOH A 54 454 82 HOH HOH . L 4 HOH A 55 455 45 HOH HOH . L 4 HOH A 56 456 18 HOH HOH . L 4 HOH A 57 457 28 HOH HOH . L 4 HOH A 58 458 6 HOH HOH . L 4 HOH A 59 459 103 HOH HOH . L 4 HOH A 60 460 7 HOH HOH . L 4 HOH A 61 461 44 HOH HOH . L 4 HOH A 62 462 70 HOH HOH . L 4 HOH A 63 463 78 HOH HOH . L 4 HOH A 64 464 116 HOH HOH . L 4 HOH A 65 465 50 HOH HOH . L 4 HOH A 66 466 52 HOH HOH . L 4 HOH A 67 467 32 HOH HOH . L 4 HOH A 68 468 66 HOH HOH . L 4 HOH A 69 469 107 HOH HOH . L 4 HOH A 70 470 23 HOH HOH . L 4 HOH A 71 471 27 HOH HOH . L 4 HOH A 72 472 89 HOH HOH . L 4 HOH A 73 473 143 HOH HOH . L 4 HOH A 74 474 8 HOH HOH . L 4 HOH A 75 475 93 HOH HOH . L 4 HOH A 76 476 118 HOH HOH . L 4 HOH A 77 477 33 HOH HOH . L 4 HOH A 78 478 113 HOH HOH . L 4 HOH A 79 479 109 HOH HOH . L 4 HOH A 80 480 56 HOH HOH . L 4 HOH A 81 481 91 HOH HOH . L 4 HOH A 82 482 130 HOH HOH . L 4 HOH A 83 483 3 HOH HOH . L 4 HOH A 84 484 43 HOH HOH . L 4 HOH A 85 485 135 HOH HOH . L 4 HOH A 86 486 53 HOH HOH . L 4 HOH A 87 487 86 HOH HOH . L 4 HOH A 88 488 47 HOH HOH . L 4 HOH A 89 489 137 HOH HOH . L 4 HOH A 90 490 139 HOH HOH . L 4 HOH A 91 491 96 HOH HOH . L 4 HOH A 92 492 106 HOH HOH . L 4 HOH A 93 493 62 HOH HOH . L 4 HOH A 94 494 105 HOH HOH . L 4 HOH A 95 495 111 HOH HOH . L 4 HOH A 96 496 54 HOH HOH . L 4 HOH A 97 497 99 HOH HOH . L 4 HOH A 98 498 58 HOH HOH . L 4 HOH A 99 499 76 HOH HOH . L 4 HOH A 100 500 42 HOH HOH . L 4 HOH A 101 501 83 HOH HOH . L 4 HOH A 102 502 85 HOH HOH . L 4 HOH A 103 503 141 HOH HOH . L 4 HOH A 104 504 126 HOH HOH . L 4 HOH A 105 505 81 HOH HOH . L 4 HOH A 106 506 120 HOH HOH . L 4 HOH A 107 507 138 HOH HOH . L 4 HOH A 108 508 36 HOH HOH . L 4 HOH A 109 509 87 HOH HOH . L 4 HOH A 110 510 11 HOH HOH . L 4 HOH A 111 511 84 HOH HOH . L 4 HOH A 112 512 75 HOH HOH . L 4 HOH A 113 513 136 HOH HOH . L 4 HOH A 114 514 110 HOH HOH . L 4 HOH A 115 515 88 HOH HOH . L 4 HOH A 116 516 39 HOH HOH . L 4 HOH A 117 517 142 HOH HOH . L 4 HOH A 118 518 124 HOH HOH . L 4 HOH A 119 519 19 HOH HOH . L 4 HOH A 120 520 55 HOH HOH . L 4 HOH A 121 521 64 HOH HOH . L 4 HOH A 122 522 132 HOH HOH . L 4 HOH A 123 523 128 HOH HOH . L 4 HOH A 124 524 121 HOH HOH . L 4 HOH A 125 525 97 HOH HOH . L 4 HOH A 126 526 122 HOH HOH . L 4 HOH A 127 527 140 HOH HOH . L 4 HOH A 128 528 112 HOH HOH . L 4 HOH A 129 529 65 HOH HOH . L 4 HOH A 130 530 131 HOH HOH . L 4 HOH A 131 531 12 HOH HOH . L 4 HOH A 132 532 119 HOH HOH . L 4 HOH A 133 533 90 HOH HOH . L 4 HOH A 134 534 24 HOH HOH . L 4 HOH A 135 535 100 HOH HOH . L 4 HOH A 136 536 133 HOH HOH . L 4 HOH A 137 537 37 HOH HOH . L 4 HOH A 138 538 25 HOH HOH . L 4 HOH A 139 539 108 HOH HOH . L 4 HOH A 140 540 117 HOH HOH . L 4 HOH A 141 541 104 HOH HOH . L 4 HOH A 142 542 72 HOH HOH . L 4 HOH A 143 543 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 40.651 -55.256 -7.415 1 93.7 ? P PO4 304 A 1 HETATM 2 O O1 PO4 . . . E 2 41.111 -55.572 -6.012 1 93.7 ? O1 PO4 304 A 1 HETATM 3 O O2 PO4 . . . E 2 41.719 -55.672 -8.398 1 92.99 ? O2 PO4 304 A 1 HETATM 4 O O3 PO4 . . . E 2 39.377 -56.011 -7.711 1 93.28 ? O3 PO4 304 A 1 HETATM 5 O O4 PO4 . . . E 2 40.399 -53.772 -7.541 1 92.75 ? O4 PO4 304 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 5 #