data_9JYO
#
_model_server_result.job_id            Q8nFEiSy-NJ4R-PUp2qF2A 
_model_server_result.datetime_utc      '2025-08-28 09:00:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9jyo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    9JYO 
#
_exptl.entry_id    9JYO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              370.436 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9JYO 
_cell.length_a            69.512 
_cell.length_b            69.512 
_cell.length_c            79.653 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9JYO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C16 H34 O9' 
_chem_comp.formula_weight    370.436 
_chem_comp.id                PE8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 PE8 sing 257 n n 
O1 HO1 PE8 sing 258 n n 
C2 C3 PE8 sing 259 n n 
C2 H21 PE8 sing 260 n n 
C2 H22 PE8 sing 261 n n 
C3 O4 PE8 sing 262 n n 
C3 H31 PE8 sing 263 n n 
C3 H32 PE8 sing 264 n n 
O4 C5 PE8 sing 265 n n 
C5 C6 PE8 sing 266 n n 
C5 H51 PE8 sing 267 n n 
C5 H52 PE8 sing 268 n n 
C6 O7 PE8 sing 269 n n 
C6 H61 PE8 sing 270 n n 
C6 H62 PE8 sing 271 n n 
O7 C8 PE8 sing 272 n n 
C8 C9 PE8 sing 273 n n 
C8 H81 PE8 sing 274 n n 
C8 H82 PE8 sing 275 n n 
C9 O10 PE8 sing 276 n n 
C9 H91 PE8 sing 277 n n 
C9 H92 PE8 sing 278 n n 
O10 C11 PE8 sing 279 n n 
C11 C12 PE8 sing 280 n n 
C11 H111 PE8 sing 281 n n 
C11 H112 PE8 sing 282 n n 
C12 O13 PE8 sing 283 n n 
C12 H121 PE8 sing 284 n n 
C12 H122 PE8 sing 285 n n 
O13 C14 PE8 sing 286 n n 
C14 C15 PE8 sing 287 n n 
C14 H141 PE8 sing 288 n n 
C14 H142 PE8 sing 289 n n 
C15 O16 PE8 sing 290 n n 
C15 H151 PE8 sing 291 n n 
C15 H152 PE8 sing 292 n n 
O16 C17 PE8 sing 293 n n 
C17 C18 PE8 sing 294 n n 
C17 H171 PE8 sing 295 n n 
C17 H172 PE8 sing 296 n n 
C18 O19 PE8 sing 297 n n 
C18 H181 PE8 sing 298 n n 
C18 H182 PE8 sing 299 n n 
O19 C20 PE8 sing 300 n n 
C20 C21 PE8 sing 301 n n 
C20 H201 PE8 sing 302 n n 
C20 H202 PE8 sing 303 n n 
C21 O22 PE8 sing 304 n n 
C21 H211 PE8 sing 305 n n 
C21 H212 PE8 sing 306 n n 
O22 C23 PE8 sing 307 n n 
C23 C24 PE8 sing 308 n n 
C23 H231 PE8 sing 309 n n 
C23 H232 PE8 sing 310 n n 
C24 O25 PE8 sing 311 n n 
C24 H241 PE8 sing 312 n n 
C24 H242 PE8 sing 313 n n 
O25 H25 PE8 sing 314 n n 
#
_atom_sites.entry_id                     9JYO 
_atom_sites.fract_transf_matrix[1][1]    0.014386 
_atom_sites.fract_transf_matrix[1][2]    0.008306 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016612 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012554 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 A1EDY A 1 301 301 A1EDY LIG . 
C 3 PE8 A 1 302 302 PE8 PE8 . 
D 4 SO4 A 1 303 2 SO4 SO4 . 
E 5 CL A 1 304 1 CL CL . 
F 6 HOH A 1 401 51 HOH HOH . 
F 6 HOH A 2 402 32 HOH HOH . 
F 6 HOH A 3 403 119 HOH HOH . 
F 6 HOH A 4 404 35 HOH HOH . 
F 6 HOH A 5 405 33 HOH HOH . 
F 6 HOH A 6 406 70 HOH HOH . 
F 6 HOH A 7 407 169 HOH HOH . 
F 6 HOH A 8 408 141 HOH HOH . 
F 6 HOH A 9 409 87 HOH HOH . 
F 6 HOH A 10 410 154 HOH HOH . 
F 6 HOH A 11 411 48 HOH HOH . 
F 6 HOH A 12 412 93 HOH HOH . 
F 6 HOH A 13 413 66 HOH HOH . 
F 6 HOH A 14 414 106 HOH HOH . 
F 6 HOH A 15 415 160 HOH HOH . 
F 6 HOH A 16 416 159 HOH HOH . 
F 6 HOH A 17 417 40 HOH HOH . 
F 6 HOH A 18 418 132 HOH HOH . 
F 6 HOH A 19 419 107 HOH HOH . 
F 6 HOH A 20 420 76 HOH HOH . 
F 6 HOH A 21 421 156 HOH HOH . 
F 6 HOH A 22 422 30 HOH HOH . 
F 6 HOH A 23 423 105 HOH HOH . 
F 6 HOH A 24 424 7 HOH HOH . 
F 6 HOH A 25 425 14 HOH HOH . 
F 6 HOH A 26 426 41 HOH HOH . 
F 6 HOH A 27 427 83 HOH HOH . 
F 6 HOH A 28 428 99 HOH HOH . 
F 6 HOH A 29 429 88 HOH HOH . 
F 6 HOH A 30 430 29 HOH HOH . 
F 6 HOH A 31 431 57 HOH HOH . 
F 6 HOH A 32 432 82 HOH HOH . 
F 6 HOH A 33 433 167 HOH HOH . 
F 6 HOH A 34 434 23 HOH HOH . 
F 6 HOH A 35 435 63 HOH HOH . 
F 6 HOH A 36 436 89 HOH HOH . 
F 6 HOH A 37 437 103 HOH HOH . 
F 6 HOH A 38 438 10 HOH HOH . 
F 6 HOH A 39 439 134 HOH HOH . 
F 6 HOH A 40 440 31 HOH HOH . 
F 6 HOH A 41 441 117 HOH HOH . 
F 6 HOH A 42 442 11 HOH HOH . 
F 6 HOH A 43 443 25 HOH HOH . 
F 6 HOH A 44 444 122 HOH HOH . 
F 6 HOH A 45 445 95 HOH HOH . 
F 6 HOH A 46 446 74 HOH HOH . 
F 6 HOH A 47 447 5 HOH HOH . 
F 6 HOH A 48 448 36 HOH HOH . 
F 6 HOH A 49 449 47 HOH HOH . 
F 6 HOH A 50 450 69 HOH HOH . 
F 6 HOH A 51 451 9 HOH HOH . 
F 6 HOH A 52 452 108 HOH HOH . 
F 6 HOH A 53 453 27 HOH HOH . 
F 6 HOH A 54 454 21 HOH HOH . 
F 6 HOH A 55 455 2 HOH HOH . 
F 6 HOH A 56 456 147 HOH HOH . 
F 6 HOH A 57 457 4 HOH HOH . 
F 6 HOH A 58 458 138 HOH HOH . 
F 6 HOH A 59 459 133 HOH HOH . 
F 6 HOH A 60 460 113 HOH HOH . 
F 6 HOH A 61 461 182 HOH HOH . 
F 6 HOH A 62 462 64 HOH HOH . 
F 6 HOH A 63 463 12 HOH HOH . 
F 6 HOH A 64 464 34 HOH HOH . 
F 6 HOH A 65 465 1 HOH HOH . 
F 6 HOH A 66 466 15 HOH HOH . 
F 6 HOH A 67 467 18 HOH HOH . 
F 6 HOH A 68 468 24 HOH HOH . 
F 6 HOH A 69 469 109 HOH HOH . 
F 6 HOH A 70 470 92 HOH HOH . 
F 6 HOH A 71 471 145 HOH HOH . 
F 6 HOH A 72 472 8 HOH HOH . 
F 6 HOH A 73 473 128 HOH HOH . 
F 6 HOH A 74 474 13 HOH HOH . 
F 6 HOH A 75 475 38 HOH HOH . 
F 6 HOH A 76 476 44 HOH HOH . 
F 6 HOH A 77 477 60 HOH HOH . 
F 6 HOH A 78 478 65 HOH HOH . 
F 6 HOH A 79 479 71 HOH HOH . 
F 6 HOH A 80 480 61 HOH HOH . 
F 6 HOH A 81 481 91 HOH HOH . 
F 6 HOH A 82 482 131 HOH HOH . 
F 6 HOH A 83 483 39 HOH HOH . 
F 6 HOH A 84 484 28 HOH HOH . 
F 6 HOH A 85 485 54 HOH HOH . 
F 6 HOH A 86 486 155 HOH HOH . 
F 6 HOH A 87 487 43 HOH HOH . 
F 6 HOH A 88 488 139 HOH HOH . 
F 6 HOH A 89 489 94 HOH HOH . 
F 6 HOH A 90 490 16 HOH HOH . 
F 6 HOH A 91 491 78 HOH HOH . 
F 6 HOH A 92 492 55 HOH HOH . 
F 6 HOH A 93 493 73 HOH HOH . 
F 6 HOH A 94 494 59 HOH HOH . 
F 6 HOH A 95 495 45 HOH HOH . 
F 6 HOH A 96 496 72 HOH HOH . 
F 6 HOH A 97 497 80 HOH HOH . 
F 6 HOH A 98 498 97 HOH HOH . 
F 6 HOH A 99 499 171 HOH HOH . 
F 6 HOH A 100 500 86 HOH HOH . 
F 6 HOH A 101 501 53 HOH HOH . 
F 6 HOH A 102 502 3 HOH HOH . 
F 6 HOH A 103 503 19 HOH HOH . 
F 6 HOH A 104 504 101 HOH HOH . 
F 6 HOH A 105 505 75 HOH HOH . 
F 6 HOH A 106 506 137 HOH HOH . 
F 6 HOH A 107 507 17 HOH HOH . 
F 6 HOH A 108 508 102 HOH HOH . 
F 6 HOH A 109 509 140 HOH HOH . 
F 6 HOH A 110 510 20 HOH HOH . 
F 6 HOH A 111 511 90 HOH HOH . 
F 6 HOH A 112 512 52 HOH HOH . 
F 6 HOH A 113 513 166 HOH HOH . 
F 6 HOH A 114 514 62 HOH HOH . 
F 6 HOH A 115 515 149 HOH HOH . 
F 6 HOH A 116 516 146 HOH HOH . 
F 6 HOH A 117 517 120 HOH HOH . 
F 6 HOH A 118 518 56 HOH HOH . 
F 6 HOH A 119 519 168 HOH HOH . 
F 6 HOH A 120 520 110 HOH HOH . 
F 6 HOH A 121 521 121 HOH HOH . 
F 6 HOH A 122 522 183 HOH HOH . 
F 6 HOH A 123 523 135 HOH HOH . 
F 6 HOH A 124 524 142 HOH HOH . 
F 6 HOH A 125 525 6 HOH HOH . 
F 6 HOH A 126 526 118 HOH HOH . 
F 6 HOH A 127 527 158 HOH HOH . 
F 6 HOH A 128 528 111 HOH HOH . 
F 6 HOH A 129 529 115 HOH HOH . 
F 6 HOH A 130 530 37 HOH HOH . 
F 6 HOH A 131 531 179 HOH HOH . 
F 6 HOH A 132 532 130 HOH HOH . 
F 6 HOH A 133 533 129 HOH HOH . 
F 6 HOH A 134 534 42 HOH HOH . 
F 6 HOH A 135 535 50 HOH HOH . 
F 6 HOH A 136 536 173 HOH HOH . 
F 6 HOH A 137 537 22 HOH HOH . 
F 6 HOH A 138 538 150 HOH HOH . 
F 6 HOH A 139 539 49 HOH HOH . 
F 6 HOH A 140 540 144 HOH HOH . 
F 6 HOH A 141 541 143 HOH HOH . 
F 6 HOH A 142 542 68 HOH HOH . 
F 6 HOH A 143 543 98 HOH HOH . 
F 6 HOH A 144 544 84 HOH HOH . 
F 6 HOH A 145 545 175 HOH HOH . 
F 6 HOH A 146 546 26 HOH HOH . 
F 6 HOH A 147 547 178 HOH HOH . 
F 6 HOH A 148 548 126 HOH HOH . 
F 6 HOH A 149 549 81 HOH HOH . 
F 6 HOH A 150 550 127 HOH HOH . 
F 6 HOH A 151 551 58 HOH HOH . 
F 6 HOH A 152 552 112 HOH HOH . 
F 6 HOH A 153 553 136 HOH HOH . 
F 6 HOH A 154 554 79 HOH HOH . 
F 6 HOH A 155 555 104 HOH HOH . 
F 6 HOH A 156 556 162 HOH HOH . 
F 6 HOH A 157 557 180 HOH HOH . 
F 6 HOH A 158 558 151 HOH HOH . 
F 6 HOH A 159 559 67 HOH HOH . 
F 6 HOH A 160 560 163 HOH HOH . 
F 6 HOH A 161 561 125 HOH HOH . 
F 6 HOH A 162 562 96 HOH HOH . 
F 6 HOH A 163 563 177 HOH HOH . 
F 6 HOH A 164 564 100 HOH HOH . 
F 6 HOH A 165 565 77 HOH HOH . 
F 6 HOH A 166 566 172 HOH HOH . 
F 6 HOH A 167 567 46 HOH HOH . 
F 6 HOH A 168 568 153 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PE8 . . . C 3 -23.532 29.658 3.894 1 45.73 ? O1 PE8 302 A 1 
HETATM 2 C C2 PE8 . . . C 3 -22.871 28.907 2.898 1 47.21 ? C2 PE8 302 A 1 
HETATM 3 C C3 PE8 . . . C 3 -21.392 29.13 2.91 1 52.9 ? C3 PE8 302 A 1 
HETATM 4 O O4 PE8 . . . C 3 -20.853 28.924 1.61 1 56.22 ? O4 PE8 302 A 1 
HETATM 5 C C5 PE8 . . . C 3 -19.559 29.493 1.455 1 47.68 ? C5 PE8 302 A 1 
HETATM 6 C C6 PE8 . . . C 3 -18.758 29.235 2.683 1 42.22 ? C6 PE8 302 A 1 
HETATM 7 O O7 PE8 . . . C 3 -17.599 30.052 2.663 1 42.69 ? O7 PE8 302 A 1 
HETATM 8 C C8 PE8 . . . C 3 -16.422 29.326 2.972 1 38.54 ? C8 PE8 302 A 1 
HETATM 9 C C9 PE8 . . . C 3 -16.634 28.535 4.209 1 38.4 ? C9 PE8 302 A 1 
HETATM 10 O O10 PE8 . . . C 3 -16.218 29.301 5.327 1 37.21 ? O10 PE8 302 A 1 
HETATM 11 C C11 PE8 . . . C 3 -16.722 28.797 6.553 1 37.42 ? C11 PE8 302 A 1 
HETATM 12 C C12 PE8 . . . C 3 -18.002 29.487 6.844 1 29.86 ? C12 PE8 302 A 1 
HETATM 13 O O13 PE8 . . . C 3 -18.046 29.845 8.216 1 42.21 ? O13 PE8 302 A 1 
HETATM 14 C C14 PE8 . . . C 3 -18.971 30.889 8.486 1 35.53 ? C14 PE8 302 A 1 
HETATM 15 C C15 PE8 . . . C 3 -20.177 30.746 7.619 1 31.29 ? C15 PE8 302 A 1 
HETATM 16 O O16 PE8 . . . C 3 -20.947 29.619 8.018 1 33.48 ? O16 PE8 302 A 1 
HETATM 17 C C17 PE8 . . . C 3 -22.274 29.668 7.518 1 30.15 ? C17 PE8 302 A 1 
HETATM 18 C C18 PE8 . . . C 3 -22.701 28.305 7.111 1 30.75 ? C18 PE8 302 A 1 
HETATM 19 O O19 PE8 . . . C 3 -22.572 27.432 8.223 1 32.77 ? O19 PE8 302 A 1 
HETATM 20 C C20 PE8 . . . C 3 -23.362 26.256 8.101 1 30.32 ? C20 PE8 302 A 1 
HETATM 21 C C21 PE8 . . . C 3 -22.821 25.218 9.023 1 31.25 ? C21 PE8 302 A 1 
HETATM 22 O O22 PE8 . . . C 3 -21.412 25.177 8.864 1 34.85 ? O22 PE8 302 A 1 
HETATM 23 C C23 PE8 . . . C 3 -20.767 24.2 9.665 1 31.9 ? C23 PE8 302 A 1 
HETATM 24 C C24 PE8 . . . C 3 -21.243 24.23 11.062 1 30.34 ? C24 PE8 302 A 1 
HETATM 25 O O25 PE8 . . . C 3 -20.546 23.294 11.835 1 36.18 ? O25 PE8 302 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           420 
_model_server_stats.encode_time_ms          22 
_model_server_stats.element_count           25 
#