data_9KBS # _model_server_result.job_id BKmBAq0Hsxn7Zi9dGU0aJQ _model_server_result.datetime_utc '2024-12-26 23:05:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9kbs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 9KBS # _exptl.entry_id 9KBS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9KBS _cell.length_a 50.01 _cell.length_b 54.9 _cell.length_c 161.31 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9KBS _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 9KBS _atom_sites.fract_transf_matrix[1][1] 0.019996 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 201 GOL GOL . D 2 GOL B 1 201 201 GOL GOL . E 2 GOL B 1 202 202 GOL GOL . F 3 HOH A 1 301 18 HOH HOH . F 3 HOH A 2 302 38 HOH HOH . F 3 HOH A 3 303 2 HOH HOH . F 3 HOH A 4 304 14 HOH HOH . F 3 HOH A 5 305 6 HOH HOH . F 3 HOH A 6 306 21 HOH HOH . F 3 HOH A 7 307 94 HOH HOH . F 3 HOH A 8 308 45 HOH HOH . F 3 HOH A 9 309 53 HOH HOH . F 3 HOH A 10 310 10 HOH HOH . F 3 HOH A 11 311 1 HOH HOH . F 3 HOH A 12 312 89 HOH HOH . F 3 HOH A 13 313 8 HOH HOH . F 3 HOH A 14 314 37 HOH HOH . F 3 HOH A 15 315 106 HOH HOH . F 3 HOH A 16 316 81 HOH HOH . F 3 HOH A 17 317 17 HOH HOH . F 3 HOH A 18 318 7 HOH HOH . F 3 HOH A 19 319 90 HOH HOH . F 3 HOH A 20 320 62 HOH HOH . F 3 HOH A 21 321 64 HOH HOH . F 3 HOH A 22 322 46 HOH HOH . F 3 HOH A 23 323 34 HOH HOH . F 3 HOH A 24 324 30 HOH HOH . F 3 HOH A 25 325 93 HOH HOH . F 3 HOH A 26 326 25 HOH HOH . F 3 HOH A 27 327 54 HOH HOH . F 3 HOH A 28 328 50 HOH HOH . F 3 HOH A 29 329 96 HOH HOH . F 3 HOH A 30 330 61 HOH HOH . F 3 HOH A 31 331 77 HOH HOH . F 3 HOH A 32 332 60 HOH HOH . F 3 HOH A 33 333 88 HOH HOH . F 3 HOH A 34 334 92 HOH HOH . F 3 HOH A 35 335 120 HOH HOH . F 3 HOH A 36 336 59 HOH HOH . F 3 HOH A 37 337 101 HOH HOH . F 3 HOH A 38 338 87 HOH HOH . F 3 HOH A 39 339 48 HOH HOH . F 3 HOH A 40 340 76 HOH HOH . F 3 HOH A 41 341 57 HOH HOH . F 3 HOH A 42 342 115 HOH HOH . F 3 HOH A 43 343 86 HOH HOH . F 3 HOH A 44 344 116 HOH HOH . F 3 HOH A 45 345 123 HOH HOH . F 3 HOH A 46 346 100 HOH HOH . F 3 HOH A 47 347 67 HOH HOH . F 3 HOH A 48 348 68 HOH HOH . F 3 HOH A 49 349 112 HOH HOH . F 3 HOH A 50 350 79 HOH HOH . F 3 HOH A 51 351 98 HOH HOH . F 3 HOH A 52 352 113 HOH HOH . F 3 HOH A 53 353 97 HOH HOH . F 3 HOH A 54 354 122 HOH HOH . F 3 HOH A 55 355 51 HOH HOH . G 3 HOH B 1 301 69 HOH HOH . G 3 HOH B 2 302 83 HOH HOH . G 3 HOH B 3 303 3 HOH HOH . G 3 HOH B 4 304 27 HOH HOH . G 3 HOH B 5 305 114 HOH HOH . G 3 HOH B 6 306 11 HOH HOH . G 3 HOH B 7 307 121 HOH HOH . G 3 HOH B 8 308 5 HOH HOH . G 3 HOH B 9 309 41 HOH HOH . G 3 HOH B 10 310 103 HOH HOH . G 3 HOH B 11 311 9 HOH HOH . G 3 HOH B 12 312 13 HOH HOH . G 3 HOH B 13 313 36 HOH HOH . G 3 HOH B 14 314 80 HOH HOH . G 3 HOH B 15 315 22 HOH HOH . G 3 HOH B 16 316 42 HOH HOH . G 3 HOH B 17 317 19 HOH HOH . G 3 HOH B 18 318 23 HOH HOH . G 3 HOH B 19 319 26 HOH HOH . G 3 HOH B 20 320 20 HOH HOH . G 3 HOH B 21 321 65 HOH HOH . G 3 HOH B 22 322 39 HOH HOH . G 3 HOH B 23 323 63 HOH HOH . G 3 HOH B 24 324 58 HOH HOH . G 3 HOH B 25 325 66 HOH HOH . G 3 HOH B 26 326 31 HOH HOH . G 3 HOH B 27 327 16 HOH HOH . G 3 HOH B 28 328 110 HOH HOH . G 3 HOH B 29 329 44 HOH HOH . G 3 HOH B 30 330 24 HOH HOH . G 3 HOH B 31 331 71 HOH HOH . G 3 HOH B 32 332 56 HOH HOH . G 3 HOH B 33 333 29 HOH HOH . G 3 HOH B 34 334 43 HOH HOH . G 3 HOH B 35 335 15 HOH HOH . G 3 HOH B 36 336 52 HOH HOH . G 3 HOH B 37 337 4 HOH HOH . G 3 HOH B 38 338 49 HOH HOH . G 3 HOH B 39 339 28 HOH HOH . G 3 HOH B 40 340 78 HOH HOH . G 3 HOH B 41 341 55 HOH HOH . G 3 HOH B 42 342 102 HOH HOH . G 3 HOH B 43 343 35 HOH HOH . G 3 HOH B 44 344 47 HOH HOH . G 3 HOH B 45 345 109 HOH HOH . G 3 HOH B 46 346 117 HOH HOH . G 3 HOH B 47 347 73 HOH HOH . G 3 HOH B 48 348 105 HOH HOH . G 3 HOH B 49 349 84 HOH HOH . G 3 HOH B 50 350 119 HOH HOH . G 3 HOH B 51 351 118 HOH HOH . G 3 HOH B 52 352 70 HOH HOH . G 3 HOH B 53 353 40 HOH HOH . G 3 HOH B 54 354 72 HOH HOH . G 3 HOH B 55 355 104 HOH HOH . G 3 HOH B 56 356 33 HOH HOH . G 3 HOH B 57 357 85 HOH HOH . G 3 HOH B 58 358 75 HOH HOH . G 3 HOH B 59 359 107 HOH HOH . G 3 HOH B 60 360 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 15.996 12.571 27.033 1 42.22 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . C 2 15.653 13.657 27.839 1 53.53 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . C 2 17.516 12.681 26.75 1 47.73 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . C 2 18.2 13.217 27.831 1 46.62 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . C 2 17.985 11.238 26.407 1 23.53 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . C 2 16.858 10.426 26.345 1 45.63 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 444 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #