data_9KRE
#
_model_server_result.job_id            DKyp5fJxDfXi1-5BhS-g0Q 
_model_server_result.datetime_utc      '2025-07-27 11:55:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9kre 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":301}' 
#
_entry.id    9KRE 
#
_exptl.entry_id    9KRE 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9KRE 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9KRE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 POV sing 245 n n 
N C13 POV sing 246 n n 
N C14 POV sing 247 n n 
N C15 POV sing 248 n n 
P O11 POV sing 249 n n 
P O12 POV sing 250 n n 
P O13 POV sing 251 n n 
P O14 POV doub 252 n n 
C1 C2 POV sing 253 n n 
C1 O11 POV sing 254 n n 
C1 H1 POV sing 255 n n 
C1 H1A POV sing 256 n n 
C2 C3 POV sing 257 n n 
C2 O21 POV sing 258 n n 
C2 H2 POV sing 259 n n 
C3 O31 POV sing 260 n n 
C3 H3 POV sing 261 n n 
C3 H3A POV sing 262 n n 
C210 C211 POV sing 263 n n 
C210 C29 POV doub 264 z n 
C210 H210 POV sing 265 n n 
C310 C311 POV sing 266 n n 
C310 C39 POV sing 267 n n 
C310 H310 POV sing 268 n n 
C310 H31A POV sing 269 n n 
C11 C12 POV sing 270 n n 
C11 O12 POV sing 271 n n 
C11 H11 POV sing 272 n n 
C11 H11A POV sing 273 n n 
C211 C212 POV sing 274 n n 
C211 H211 POV sing 275 n n 
C211 H21A POV sing 276 n n 
C311 C312 POV sing 277 n n 
C311 H311 POV sing 278 n n 
C311 H31B POV sing 279 n n 
C12 H12 POV sing 280 n n 
C12 H12A POV sing 281 n n 
C212 C213 POV sing 282 n n 
C212 H212 POV sing 283 n n 
C212 H21B POV sing 284 n n 
C312 C313 POV sing 285 n n 
C312 H312 POV sing 286 n n 
C312 H31C POV sing 287 n n 
C13 H13 POV sing 288 n n 
C13 H13A POV sing 289 n n 
C13 H13B POV sing 290 n n 
C213 C214 POV sing 291 n n 
C213 H213 POV sing 292 n n 
C213 H21C POV sing 293 n n 
C313 C314 POV sing 294 n n 
C313 H313 POV sing 295 n n 
C313 H31D POV sing 296 n n 
C14 H14 POV sing 297 n n 
C14 H14A POV sing 298 n n 
C14 H14B POV sing 299 n n 
C214 C215 POV sing 300 n n 
C214 H214 POV sing 301 n n 
C214 H21D POV sing 302 n n 
C314 C315 POV sing 303 n n 
C314 H314 POV sing 304 n n 
C314 H31E POV sing 305 n n 
C15 H15 POV sing 306 n n 
C15 H15A POV sing 307 n n 
C15 H15B POV sing 308 n n 
C215 C216 POV sing 309 n n 
C215 H215 POV sing 310 n n 
C215 H21E POV sing 311 n n 
C315 C316 POV sing 312 n n 
C315 H315 POV sing 313 n n 
C315 H31F POV sing 314 n n 
C216 C217 POV sing 315 n n 
C216 H216 POV sing 316 n n 
C216 H21F POV sing 317 n n 
C316 H316 POV sing 318 n n 
C316 H31G POV sing 319 n n 
C316 H31H POV sing 320 n n 
C217 C218 POV sing 321 n n 
C217 H217 POV sing 322 n n 
C217 H21G POV sing 323 n n 
C218 H218 POV sing 324 n n 
C218 H21H POV sing 325 n n 
C218 H21J POV sing 326 n n 
C21 O21 POV sing 327 n n 
C21 C22 POV sing 328 n n 
C21 O22 POV doub 329 n n 
C22 C23 POV sing 330 n n 
C22 H22 POV sing 331 n n 
C22 H22A POV sing 332 n n 
C23 C24 POV sing 333 n n 
C23 H23 POV sing 334 n n 
C23 H23A POV sing 335 n n 
C24 C25 POV sing 336 n n 
C24 H24 POV sing 337 n n 
C24 H24A POV sing 338 n n 
C25 C26 POV sing 339 n n 
C25 H25 POV sing 340 n n 
C25 H25A POV sing 341 n n 
C26 C27 POV sing 342 n n 
C26 H26 POV sing 343 n n 
C26 H26A POV sing 344 n n 
C27 C28 POV sing 345 n n 
C27 H27 POV sing 346 n n 
C27 H27A POV sing 347 n n 
C28 C29 POV sing 348 n n 
C28 H28 POV sing 349 n n 
C28 H28A POV sing 350 n n 
C29 H29 POV sing 351 n n 
C31 O31 POV sing 352 n n 
C31 C32 POV sing 353 n n 
C31 O32 POV doub 354 n n 
C32 C33 POV sing 355 n n 
C32 H32 POV sing 356 n n 
C32 H32A POV sing 357 n n 
C33 C34 POV sing 358 n n 
C33 H33 POV sing 359 n n 
C33 H33A POV sing 360 n n 
C34 C35 POV sing 361 n n 
C34 H34 POV sing 362 n n 
C34 H34A POV sing 363 n n 
C35 C36 POV sing 364 n n 
C35 H35 POV sing 365 n n 
C35 H35A POV sing 366 n n 
C36 C37 POV sing 367 n n 
C36 H36 POV sing 368 n n 
C36 H36A POV sing 369 n n 
C37 C38 POV sing 370 n n 
C37 H37 POV sing 371 n n 
C37 H37A POV sing 372 n n 
C38 C39 POV sing 373 n n 
C38 H38 POV sing 374 n n 
C38 H38A POV sing 375 n n 
C39 H39 POV sing 376 n n 
C39 H39A POV sing 377 n n 
#
_atom_sites.entry_id                     9KRE 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 2 POV A 1 301 301 POV POV . 
I 2 POV A 1 302 301 POV POV . 
J 2 POV B 1 301 301 POV POV . 
K 2 POV B 1 302 301 POV POV . 
L 2 POV C 1 301 301 POV POV . 
M 2 POV D 1 301 301 POV POV . 
N 2 POV E 1 301 301 POV POV . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N POV . . . H 2 149.54 133.245 97.285 1 167.57 ? N POV 301 A 1 
HETATM 2 P P POV . . . H 2 151.021 129.49 98.124 1 188.86 ? P POV 301 A 1 
HETATM 3 C C1 POV . . . H 2 149.851 127.545 99.446 1 169.08 ? C1 POV 301 A 1 
HETATM 4 C C2 POV . . . H 2 150.151 126.124 99.031 1 166.34 ? C2 POV 301 A 1 
HETATM 5 C C3 POV . . . H 2 150.767 125.306 100.142 1 155.84 ? C3 POV 301 A 1 
HETATM 6 C C210 POV . . . H 2 150.492 129.092 92.104 1 156.5 ? C210 POV 301 A 1 
HETATM 7 C C310 POV . . . H 2 150.666 114.957 97.889 1 171.75 ? C310 POV 301 A 1 
HETATM 8 C C11 POV . . . H 2 151.321 132.043 98.684 1 179.48 ? C11 POV 301 A 1 
HETATM 9 O O11 POV . . . H 2 151.039 128.35 99.253 1 181.19 ? O11 POV 301 A 1 
HETATM 10 C C211 POV . . . H 2 149.781 130.316 92.597 1 158.76 ? C211 POV 301 A 1 
HETATM 11 C C311 POV . . . H 2 149.173 114.872 98.082 1 172.55 ? C311 POV 301 A 1 
HETATM 12 C C12 POV . . . H 2 150.889 132.557 97.332 1 177.55 ? C12 POV 301 A 1 
HETATM 13 O O12 POV . . . H 2 150.644 130.796 98.976 1 184.09 ? O12 POV 301 A 1 
HETATM 14 C C212 POV . . . H 2 150.229 130.746 93.958 1 164.25 ? C212 POV 301 A 1 
HETATM 15 C C312 POV . . . H 2 148.702 113.572 98.682 1 174.02 ? C312 POV 301 A 1 
HETATM 16 C C13 POV . . . H 2 148.486 132.263 96.921 1 152.45 ? C13 POV 301 A 1 
HETATM 17 O O13 POV . . . H 2 152.417 129.631 97.581 1 178.98 ? O13 POV 301 A 1 
HETATM 18 C C213 POV . . . H 2 151.724 130.625 94.195 1 169.59 ? C213 POV 301 A 1 
HETATM 19 C C313 POV . . . H 2 148.979 113.44 100.159 1 170.19 ? C313 POV 301 A 1 
HETATM 20 C C14 POV . . . H 2 149.213 133.83 98.612 1 155.71 ? C14 POV 301 A 1 
HETATM 21 O O14 POV . . . H 2 149.875 129.209 97.193 1 176.86 ? O14 POV 301 A 1 
HETATM 22 C C214 POV . . . H 2 152.499 131.891 93.934 1 168.68 ? C214 POV 301 A 1 
HETATM 23 C C314 POV . . . H 2 148.517 114.616 100.981 1 165.94 ? C314 POV 301 A 1 
HETATM 24 C C15 POV . . . H 2 149.55 134.33 96.267 1 170.63 ? C15 POV 301 A 1 
HETATM 25 C C215 POV . . . H 2 151.648 133.082 93.569 1 169.1 ? C215 POV 301 A 1 
HETATM 26 C C315 POV . . . H 2 149.214 114.737 102.307 1 163.2 ? C315 POV 301 A 1 
HETATM 27 C C216 POV . . . H 2 152.42 134.224 92.967 1 172.63 ? C216 POV 301 A 1 
HETATM 28 C C316 POV . . . H 2 149.302 113.427 103.051 1 162.46 ? C316 POV 301 A 1 
HETATM 29 C C217 POV . . . H 2 153.297 134.941 93.955 1 173.74 ? C217 POV 301 A 1 
HETATM 30 C C218 POV . . . H 2 152.781 136.308 94.313 1 173.68 ? C218 POV 301 A 1 
HETATM 31 C C21 POV . . . H 2 150.535 126.201 96.661 1 170.63 ? C21 POV 301 A 1 
HETATM 32 O O21 POV . . . H 2 151.057 126.111 97.893 1 173.1 ? O21 POV 301 A 1 
HETATM 33 C C22 POV . . . H 2 149.204 125.519 96.522 1 167.34 ? C22 POV 301 A 1 
HETATM 34 O O22 POV . . . H 2 151.097 126.78 95.769 1 169.38 ? O22 POV 301 A 1 
HETATM 35 C C23 POV . . . H 2 148.772 125.352 95.101 1 161.86 ? C23 POV 301 A 1 
HETATM 36 C C24 POV . . . H 2 149.302 124.071 94.479 1 159 ? C24 POV 301 A 1 
HETATM 37 C C25 POV . . . H 2 149.453 124.128 92.982 1 154.89 ? C25 POV 301 A 1 
HETATM 38 C C26 POV . . . H 2 148.666 125.236 92.331 1 155.02 ? C26 POV 301 A 1 
HETATM 39 C C27 POV . . . H 2 149.411 125.964 91.221 1 157.94 ? C27 POV 301 A 1 
HETATM 40 C C28 POV . . . H 2 148.999 127.392 91.042 1 152.89 ? C28 POV 301 A 1 
HETATM 41 C C29 POV . . . H 2 150.147 128.352 91.083 1 155.43 ? C29 POV 301 A 1 
HETATM 42 C C31 POV . . . H 2 149.884 123.362 101.127 1 151.63 ? C31 POV 301 A 1 
HETATM 43 O O31 POV . . . H 2 149.704 124.65 100.866 1 154.47 ? O31 POV 301 A 1 
HETATM 44 C C32 POV . . . H 2 150.267 122.598 99.891 1 151.69 ? C32 POV 301 A 1 
HETATM 45 O O32 POV . . . H 2 149.753 122.889 102.225 1 147.82 ? O32 POV 301 A 1 
HETATM 46 C C33 POV . . . H 2 149.106 122.271 99.007 1 148.94 ? C33 POV 301 A 1 
HETATM 47 C C34 POV . . . H 2 149.015 120.787 98.706 1 143.33 ? C34 POV 301 A 1 
HETATM 48 C C35 POV . . . H 2 149.668 119.914 99.746 1 147.02 ? C35 POV 301 A 1 
HETATM 49 C C36 POV . . . H 2 150.073 118.551 99.248 1 157.38 ? C36 POV 301 A 1 
HETATM 50 C C37 POV . . . H 2 150.967 117.79 100.193 1 160.33 ? C37 POV 301 A 1 
HETATM 51 C C38 POV . . . H 2 151.624 116.578 99.583 1 166 ? C38 POV 301 A 1 
HETATM 52 C C39 POV . . . H 2 151.245 116.325 98.147 1 169.49 ? C39 POV 301 A 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    66 
_model_server_stats.query_time_ms           909 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           52 
#