data_9KRE
#
_model_server_result.job_id            7AZ1T9EY6BgvVxoPVdWcQg 
_model_server_result.datetime_utc      '2025-07-27 11:48:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9kre 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":301}' 
#
_entry.id    9KRE 
#
_exptl.entry_id    9KRE 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9KRE 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9KRE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 POV sing 245 n n 
N C13 POV sing 246 n n 
N C14 POV sing 247 n n 
N C15 POV sing 248 n n 
P O11 POV sing 249 n n 
P O12 POV sing 250 n n 
P O13 POV sing 251 n n 
P O14 POV doub 252 n n 
C1 C2 POV sing 253 n n 
C1 O11 POV sing 254 n n 
C1 H1 POV sing 255 n n 
C1 H1A POV sing 256 n n 
C2 C3 POV sing 257 n n 
C2 O21 POV sing 258 n n 
C2 H2 POV sing 259 n n 
C3 O31 POV sing 260 n n 
C3 H3 POV sing 261 n n 
C3 H3A POV sing 262 n n 
C210 C211 POV sing 263 n n 
C210 C29 POV doub 264 z n 
C210 H210 POV sing 265 n n 
C310 C311 POV sing 266 n n 
C310 C39 POV sing 267 n n 
C310 H310 POV sing 268 n n 
C310 H31A POV sing 269 n n 
C11 C12 POV sing 270 n n 
C11 O12 POV sing 271 n n 
C11 H11 POV sing 272 n n 
C11 H11A POV sing 273 n n 
C211 C212 POV sing 274 n n 
C211 H211 POV sing 275 n n 
C211 H21A POV sing 276 n n 
C311 C312 POV sing 277 n n 
C311 H311 POV sing 278 n n 
C311 H31B POV sing 279 n n 
C12 H12 POV sing 280 n n 
C12 H12A POV sing 281 n n 
C212 C213 POV sing 282 n n 
C212 H212 POV sing 283 n n 
C212 H21B POV sing 284 n n 
C312 C313 POV sing 285 n n 
C312 H312 POV sing 286 n n 
C312 H31C POV sing 287 n n 
C13 H13 POV sing 288 n n 
C13 H13A POV sing 289 n n 
C13 H13B POV sing 290 n n 
C213 C214 POV sing 291 n n 
C213 H213 POV sing 292 n n 
C213 H21C POV sing 293 n n 
C313 C314 POV sing 294 n n 
C313 H313 POV sing 295 n n 
C313 H31D POV sing 296 n n 
C14 H14 POV sing 297 n n 
C14 H14A POV sing 298 n n 
C14 H14B POV sing 299 n n 
C214 C215 POV sing 300 n n 
C214 H214 POV sing 301 n n 
C214 H21D POV sing 302 n n 
C314 C315 POV sing 303 n n 
C314 H314 POV sing 304 n n 
C314 H31E POV sing 305 n n 
C15 H15 POV sing 306 n n 
C15 H15A POV sing 307 n n 
C15 H15B POV sing 308 n n 
C215 C216 POV sing 309 n n 
C215 H215 POV sing 310 n n 
C215 H21E POV sing 311 n n 
C315 C316 POV sing 312 n n 
C315 H315 POV sing 313 n n 
C315 H31F POV sing 314 n n 
C216 C217 POV sing 315 n n 
C216 H216 POV sing 316 n n 
C216 H21F POV sing 317 n n 
C316 H316 POV sing 318 n n 
C316 H31G POV sing 319 n n 
C316 H31H POV sing 320 n n 
C217 C218 POV sing 321 n n 
C217 H217 POV sing 322 n n 
C217 H21G POV sing 323 n n 
C218 H218 POV sing 324 n n 
C218 H21H POV sing 325 n n 
C218 H21J POV sing 326 n n 
C21 O21 POV sing 327 n n 
C21 C22 POV sing 328 n n 
C21 O22 POV doub 329 n n 
C22 C23 POV sing 330 n n 
C22 H22 POV sing 331 n n 
C22 H22A POV sing 332 n n 
C23 C24 POV sing 333 n n 
C23 H23 POV sing 334 n n 
C23 H23A POV sing 335 n n 
C24 C25 POV sing 336 n n 
C24 H24 POV sing 337 n n 
C24 H24A POV sing 338 n n 
C25 C26 POV sing 339 n n 
C25 H25 POV sing 340 n n 
C25 H25A POV sing 341 n n 
C26 C27 POV sing 342 n n 
C26 H26 POV sing 343 n n 
C26 H26A POV sing 344 n n 
C27 C28 POV sing 345 n n 
C27 H27 POV sing 346 n n 
C27 H27A POV sing 347 n n 
C28 C29 POV sing 348 n n 
C28 H28 POV sing 349 n n 
C28 H28A POV sing 350 n n 
C29 H29 POV sing 351 n n 
C31 O31 POV sing 352 n n 
C31 C32 POV sing 353 n n 
C31 O32 POV doub 354 n n 
C32 C33 POV sing 355 n n 
C32 H32 POV sing 356 n n 
C32 H32A POV sing 357 n n 
C33 C34 POV sing 358 n n 
C33 H33 POV sing 359 n n 
C33 H33A POV sing 360 n n 
C34 C35 POV sing 361 n n 
C34 H34 POV sing 362 n n 
C34 H34A POV sing 363 n n 
C35 C36 POV sing 364 n n 
C35 H35 POV sing 365 n n 
C35 H35A POV sing 366 n n 
C36 C37 POV sing 367 n n 
C36 H36 POV sing 368 n n 
C36 H36A POV sing 369 n n 
C37 C38 POV sing 370 n n 
C37 H37 POV sing 371 n n 
C37 H37A POV sing 372 n n 
C38 C39 POV sing 373 n n 
C38 H38 POV sing 374 n n 
C38 H38A POV sing 375 n n 
C39 H39 POV sing 376 n n 
C39 H39A POV sing 377 n n 
#
_atom_sites.entry_id                     9KRE 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 2 POV A 1 301 301 POV POV . 
I 2 POV A 1 302 301 POV POV . 
J 2 POV B 1 301 301 POV POV . 
K 2 POV B 1 302 301 POV POV . 
L 2 POV C 1 301 301 POV POV . 
M 2 POV D 1 301 301 POV POV . 
N 2 POV E 1 301 301 POV POV . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N POV . . . M 2 107.776 132.048 97.29 1 171.09 ? N POV 301 D 1 
HETATM 2 P P POV . . . M 2 108.071 136.074 98.13 1 194.91 ? P POV 301 D 1 
HETATM 3 C C1 POV . . . M 2 109.97 137.318 99.451 1 178.93 ? C1 POV 301 D 1 
HETATM 4 C C2 POV . . . M 2 110.317 138.729 99.037 1 177.1 ? C2 POV 301 D 1 
HETATM 5 C C3 POV . . . M 2 110.117 139.734 100.148 1 165.29 ? C3 POV 301 D 1 
HETATM 6 C C210 POV . . . M 2 108.721 136.203 92.109 1 165.9 ? C210 POV 301 D 1 
HETATM 7 C C310 POV . . . M 2 114.701 149.013 97.896 1 170.45 ? C310 POV 301 D 1 
HETATM 8 C C11 POV . . . M 2 106.693 133.904 98.689 1 185.56 ? C11 POV 301 D 1 
HETATM 9 O O11 POV . . . M 2 108.55 137.109 99.258 1 189 ? O11 POV 301 D 1 
HETATM 10 C C211 POV . . . M 2 108.83 134.792 92.602 1 165.43 ? C211 POV 301 D 1 
HETATM 11 C C311 POV . . . M 2 116.082 148.441 98.089 1 172.64 ? C311 POV 301 D 1 
HETATM 12 C C12 POV . . . M 2 106.859 133.254 97.338 1 182.98 ? C12 POV 301 D 1 
HETATM 13 O O12 POV . . . M 2 107.844 134.734 98.982 1 188.01 ? O12 POV 301 D 1 
HETATM 14 C C212 POV . . . M 2 108.241 134.599 93.964 1 170.76 ? C212 POV 301 D 1 
HETATM 15 C C312 POV . . . M 2 117.071 149.407 98.689 1 175.39 ? C312 POV 301 D 1 
HETATM 16 C C13 POV . . . M 2 109.153 132.476 96.926 1 158.06 ? C13 POV 301 D 1 
HETATM 17 O O13 POV . . . M 2 106.753 136.553 97.587 1 186.13 ? O13 POV 301 D 1 
HETATM 18 C C213 POV . . . M 2 106.946 135.357 94.201 1 175.95 ? C213 POV 301 D 1 
HETATM 19 C C313 POV . . . M 2 116.879 149.647 100.165 1 172.98 ? C313 POV 301 D 1 
HETATM 20 C C14 POV . . . M 2 107.816 131.379 98.617 1 158.62 ? C14 POV 301 D 1 
HETATM 21 O O14 POV . . . M 2 109.226 135.83 97.199 1 184.93 ? O14 POV 301 D 1 
HETATM 22 C C214 POV . . . M 2 105.698 134.553 93.939 1 173.82 ? C214 POV 301 D 1 
HETATM 23 C C314 POV . . . M 2 116.784 148.387 100.987 1 169.74 ? C314 POV 301 D 1 
HETATM 24 C C15 POV . . . M 2 107.296 131.076 96.273 1 173.33 ? C15 POV 301 D 1 
HETATM 25 C C215 POV . . . M 2 105.948 133.111 93.574 1 175.37 ? C215 POV 301 D 1 
HETATM 26 C C315 POV . . . M 2 116.105 148.58 102.314 1 166.26 ? C315 POV 301 D 1 
HETATM 27 C C216 POV . . . M 2 104.757 132.418 92.972 1 180.5 ? C216 POV 301 D 1 
HETATM 28 C C316 POV . . . M 2 116.593 149.799 103.057 1 162.18 ? C316 POV 301 D 1 
HETATM 29 C C217 POV . . . M 2 103.655 132.153 93.961 1 186.02 ? C217 POV 301 D 1 
HETATM 30 C C218 POV . . . M 2 103.527 130.697 94.319 1 186.96 ? C218 POV 301 D 1 
HETATM 31 C C21 POV . . . M 2 109.938 138.826 96.667 1 179.79 ? C21 POV 301 D 1 
HETATM 32 O O21 POV . . . M 2 109.506 139.134 97.899 1 183.52 ? O21 POV 301 D 1 
HETATM 33 C C22 POV . . . M 2 111.433 138.863 96.528 1 178.07 ? C22 POV 301 D 1 
HETATM 34 O O22 POV . . . M 2 109.18 138.549 95.775 1 176.96 ? O22 POV 301 D 1 
HETATM 35 C C23 POV . . . M 2 111.894 138.826 95.106 1 175.33 ? C23 POV 301 D 1 
HETATM 36 C C24 POV . . . M 2 111.973 140.21 94.485 1 175.79 ? C24 POV 301 D 1 
HETATM 37 C C25 POV . . . M 2 111.812 140.224 92.987 1 171.44 ? C25 POV 301 D 1 
HETATM 38 C C26 POV . . . M 2 112.04 138.885 92.336 1 171.69 ? C26 POV 301 D 1 
HETATM 39 C C27 POV . . . M 2 111.053 138.552 91.227 1 171.74 ? C27 POV 301 D 1 
HETATM 40 C C28 POV . . . M 2 110.804 137.087 91.048 1 163.4 ? C28 POV 301 D 1 
HETATM 41 C C29 POV . . . M 2 109.353 136.721 91.088 1 164.55 ? C29 POV 301 D 1 
HETATM 42 C C31 POV . . . M 2 111.757 141.101 101.133 1 155.96 ? C31 POV 301 D 1 
HETATM 43 O O31 POV . . . M 2 111.359 139.862 100.871 1 159.29 ? O31 POV 301 D 1 
HETATM 44 C C32 POV . . . M 2 111.743 141.956 99.897 1 159.1 ? C32 POV 301 D 1 
HETATM 45 O O32 POV . . . M 2 112.08 141.47 102.231 1 150.1 ? O32 POV 301 D 1 
HETATM 46 C C33 POV . . . M 2 112.931 141.746 99.013 1 155.74 ? C33 POV 301 D 1 
HETATM 47 C C34 POV . . . M 2 113.656 143.043 98.712 1 148.31 ? C34 POV 301 D 1 
HETATM 48 C C35 POV . . . M 2 113.448 144.114 99.752 1 152.7 ? C35 POV 301 D 1 
HETATM 49 C C36 POV . . . M 2 113.674 145.518 99.254 1 161.64 ? C36 POV 301 D 1 
HETATM 50 C C37 POV . . . M 2 113.199 146.591 100.199 1 163.16 ? C37 POV 301 D 1 
HETATM 51 C C38 POV . . . M 2 113.134 147.968 99.589 1 168.28 ? C38 POV 301 D 1 
HETATM 52 C C39 POV . . . M 2 113.585 148.032 98.153 1 168.81 ? C39 POV 301 D 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           52 
#