data_9KTO # _model_server_result.job_id Cr6eS6DqJ2kx-wWrADbpiA _model_server_result.datetime_utc '2025-07-27 16:26:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9kto # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":301}' # _entry.id 9KTO # _exptl.entry_id 9KTO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 566.728 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9KTO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9KTO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'C28 H57 N O8 P 1' _chem_comp.formula_weight 566.728 _chem_comp.id P1O _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 P1 P1O sing 222 n n O1 H1P P1O sing 223 n n O2 P1 P1O doub 224 n n P1 O3 P1O sing 225 n n P1 O4 P1O sing 226 n n O3 C1 P1O sing 227 n n C1 C2 P1O sing 228 n n C1 H1 P1O sing 229 n n C1 H2 P1O sing 230 n n C2 N1 P1O sing 231 n n C2 H3 P1O sing 232 n n C2 H4 P1O sing 233 n n N1 C3 P1O sing 234 n n N1 C4 P1O sing 235 n n N1 C5 P1O sing 236 n n C3 H5 P1O sing 237 n n C3 H6 P1O sing 238 n n C3 H7 P1O sing 239 n n C4 H8 P1O sing 240 n n C4 H9 P1O sing 241 n n C4 H10 P1O sing 242 n n C5 H11 P1O sing 243 n n C5 H12 P1O sing 244 n n C5 H13 P1O sing 245 n n O4 C6 P1O sing 246 n n C6 C7 P1O sing 247 n n C6 H14 P1O sing 248 n n C6 H15 P1O sing 249 n n C7 C8 P1O sing 250 n n C7 O7 P1O sing 251 n n C7 H16 P1O sing 252 n n C8 O5 P1O sing 253 n n C8 H17 P1O sing 254 n n C8 H18 P1O sing 255 n n O5 C9 P1O sing 256 n n C9 O6 P1O doub 257 n n C9 C10 P1O sing 258 n n C10 C11 P1O sing 259 n n C10 H19 P1O sing 260 n n C10 H20 P1O sing 261 n n C11 C12 P1O sing 262 n n C11 H21 P1O sing 263 n n C11 H22 P1O sing 264 n n C12 C13 P1O sing 265 n n C12 H23 P1O sing 266 n n C12 H24 P1O sing 267 n n C13 C14 P1O sing 268 n n C13 H25 P1O sing 269 n n C13 H26 P1O sing 270 n n C14 C15 P1O sing 271 n n C14 H27 P1O sing 272 n n C14 H28 P1O sing 273 n n C15 C16 P1O sing 274 n n C15 H29 P1O sing 275 n n C15 H30 P1O sing 276 n n C16 C17 P1O sing 277 n n C16 H31 P1O sing 278 n n C16 H32 P1O sing 279 n n C17 C18 P1O sing 280 n n C17 H33 P1O sing 281 n n C17 H34 P1O sing 282 n n C18 H35 P1O sing 283 n n C18 H36 P1O sing 284 n n C18 H37 P1O sing 285 n n O7 C19 P1O sing 286 n n C19 O8 P1O doub 287 n n C19 C20 P1O sing 288 n n C20 C21 P1O sing 289 n n C20 H38 P1O sing 290 n n C20 H39 P1O sing 291 n n C21 C22 P1O sing 292 n n C21 H40 P1O sing 293 n n C21 H41 P1O sing 294 n n C22 C23 P1O sing 295 n n C22 H42 P1O sing 296 n n C22 H43 P1O sing 297 n n C23 C24 P1O sing 298 n n C23 H44 P1O sing 299 n n C23 H45 P1O sing 300 n n C24 C25 P1O sing 301 n n C24 H46 P1O sing 302 n n C24 H47 P1O sing 303 n n C25 C26 P1O sing 304 n n C25 H48 P1O sing 305 n n C25 H49 P1O sing 306 n n C26 C27 P1O sing 307 n n C26 H50 P1O sing 308 n n C26 H51 P1O sing 309 n n C27 C28 P1O sing 310 n n C27 H52 P1O sing 311 n n C27 H53 P1O sing 312 n n C28 H54 P1O sing 313 n n C28 H55 P1O sing 314 n n C28 H56 P1O sing 315 n n # _atom_sites.entry_id 9KTO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 2 P1O G 1 301 302 P1O P1O . I 2 P1O G 1 302 302 P1O P1O . J 2 P1O G 1 303 302 P1O P1O . K 2 P1O C 1 301 302 P1O P1O . L 2 P1O D 1 301 302 P1O P1O . M 2 P1O E 1 301 302 P1O P1O . N 2 P1O F 1 301 302 P1O P1O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P1O . . . N 2 147.966 139.015 105.026 1 146.31 ? O1 P1O 301 F 1 HETATM 2 O O2 P1O . . . N 2 147.138 139.443 102.597 1 145.44 ? O2 P1O 301 F 1 HETATM 3 P P1 P1O . . . N 2 146.857 139.359 104.072 1 155.87 ? P1 P1O 301 F 1 HETATM 4 O O3 P1O . . . N 2 146.213 140.756 104.529 1 144.9 ? O3 P1O 301 F 1 HETATM 5 C C1 P1O . . . N 2 145.998 141.793 103.536 1 142.54 ? C1 P1O 301 F 1 HETATM 6 C C2 P1O . . . N 2 144.743 142.546 103.897 1 140.37 ? C2 P1O 301 F 1 HETATM 7 N N1 P1O . . . N 2 144.712 144.004 103.488 1 144.36 ? N1 P1O 301 F 1 HETATM 8 C C3 P1O . . . N 2 144.038 144.813 104.538 1 141.67 ? C3 P1O 301 F 1 HETATM 9 C C4 P1O . . . N 2 143.966 144.147 102.211 1 140.73 ? C4 P1O 301 F 1 HETATM 10 C C5 P1O . . . N 2 146.101 144.506 103.302 1 142.33 ? C5 P1O 301 F 1 HETATM 11 O O4 P1O . . . N 2 145.674 138.296 104.291 1 141.82 ? O4 P1O 301 F 1 HETATM 12 C C6 P1O . . . N 2 144.308 138.763 104.44 1 136.47 ? C6 P1O 301 F 1 HETATM 13 C C7 P1O . . . N 2 144.005 138.89 105.914 1 133.99 ? C7 P1O 301 F 1 HETATM 14 C C8 P1O . . . N 2 143.199 140.123 106.251 1 133.16 ? C8 P1O 301 F 1 HETATM 15 O O5 P1O . . . N 2 142.18 140.294 105.242 1 133.6 ? O5 P1O 301 F 1 HETATM 16 C C9 P1O . . . N 2 141.461 141.408 105.323 1 133.53 ? C9 P1O 301 F 1 HETATM 17 O O6 P1O . . . N 2 141.873 142.427 105.807 1 134.23 ? O6 P1O 301 F 1 HETATM 18 C C10 P1O . . . N 2 140.093 141.234 104.739 1 128.91 ? C10 P1O 301 F 1 HETATM 19 C C11 P1O . . . N 2 139.524 142.507 104.201 1 131.44 ? C11 P1O 301 F 1 HETATM 20 O O7 P1O . . . N 2 143.281 137.709 106.349 1 131.39 ? O7 P1O 301 F 1 HETATM 21 C C19 P1O . . . N 2 143.981 136.691 106.87 1 130.88 ? C19 P1O 301 F 1 HETATM 22 O O8 P1O . . . N 2 145.176 136.604 106.787 1 127.46 ? O8 P1O 301 F 1 HETATM 23 C C20 P1O . . . N 2 143.1 135.691 107.557 1 128.38 ? C20 P1O 301 F 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #