data_9KUE # _model_server_result.job_id vPYYAxfy-ZeBgAMSARxGsA _model_server_result.datetime_utc '2025-06-20 11:12:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9kue # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":101}' # _entry.id 9KUE # _exptl.entry_id 9KUE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 42.02 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AZIDE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9KUE _cell.length_a 47.57 _cell.length_b 87.256 _cell.length_c 167.609 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9KUE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 M N N ? 5 P N N ? 5 Q N N ? 5 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 30 B CYS 30 1_555 B SG CYS 51 B CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? disulf ? disulf2 C SG CYS 33 C CYS 33 1_555 C SG CYS 167 C CYS 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf3 E SG CYS 30 E CYS 30 1_555 E SG CYS 51 E CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 F SG CYS 33 F CYS 33 1_555 F SG CYS 167 F CYS 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? covale ? covale1 A C TRP 80 A TRP 79 1_555 A N CSD 81 A CSD 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale2 A C CSD 81 A CSD 80 1_555 A N ALA 82 A ALA 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale3 D C TRP 80 D TRP 79 1_555 D N CSD 81 D CSD 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale4 D C CSD 81 D CSD 80 1_555 D N ALA 82 D ALA 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? # _chem_comp.formula 'N3 -1' _chem_comp.formula_weight 42.02 _chem_comp.id AZI _chem_comp.mon_nstd_flag . _chem_comp.name 'AZIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 AZI doub 195 n n N2 N3 AZI doub 196 n n # _atom_sites.entry_id 9KUE _atom_sites.fract_transf_matrix[1][1] 0.021022 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011461 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 LUT A 1 201 210 LUT LUT . H 5 AZI A 1 202 2 AZI AZI . I 5 AZI B 1 101 1 AZI AZI . J 6 PLC C 1 201 211 PLC PLC . K 7 A1L6M C 1 202 201 A1L6M BIL . L 6 PLC C 1 203 212 PLC PLC . M 5 AZI C 1 204 3 AZI AZI . N 4 LUT D 1 201 210 LUT LUT . O 6 PLC D 1 202 211 PLC PLC . P 5 AZI D 1 203 6 AZI AZI . Q 5 AZI E 1 101 4 AZI AZI . R 5 AZI E 1 102 5 AZI AZI . S 6 PLC F 1 201 212 PLC PLC . T 7 A1L6M F 1 202 201 A1L6M BIL . U 8 HOH A 1 301 119 HOH HOH . U 8 HOH A 2 302 27 HOH HOH . U 8 HOH A 3 303 59 HOH HOH . U 8 HOH A 4 304 53 HOH HOH . U 8 HOH A 5 305 83 HOH HOH . U 8 HOH A 6 306 143 HOH HOH . U 8 HOH A 7 307 148 HOH HOH . U 8 HOH A 8 308 151 HOH HOH . U 8 HOH A 9 309 127 HOH HOH . U 8 HOH A 10 310 42 HOH HOH . U 8 HOH A 11 311 37 HOH HOH . U 8 HOH A 12 312 56 HOH HOH . U 8 HOH A 13 313 17 HOH HOH . U 8 HOH A 14 314 166 HOH HOH . U 8 HOH A 15 315 32 HOH HOH . U 8 HOH A 16 316 25 HOH HOH . U 8 HOH A 17 317 120 HOH HOH . U 8 HOH A 18 318 164 HOH HOH . U 8 HOH A 19 319 165 HOH HOH . U 8 HOH A 20 320 149 HOH HOH . U 8 HOH A 21 321 125 HOH HOH . U 8 HOH A 22 322 28 HOH HOH . U 8 HOH A 23 323 64 HOH HOH . U 8 HOH A 24 324 71 HOH HOH . U 8 HOH A 25 325 57 HOH HOH . U 8 HOH A 26 326 54 HOH HOH . U 8 HOH A 27 327 117 HOH HOH . U 8 HOH A 28 328 41 HOH HOH . U 8 HOH A 29 329 106 HOH HOH . U 8 HOH A 30 330 52 HOH HOH . U 8 HOH A 31 331 91 HOH HOH . U 8 HOH A 32 332 139 HOH HOH . V 8 HOH B 1 201 118 HOH HOH . V 8 HOH B 2 202 144 HOH HOH . V 8 HOH B 3 203 10 HOH HOH . V 8 HOH B 4 204 163 HOH HOH . V 8 HOH B 5 205 167 HOH HOH . V 8 HOH B 6 206 169 HOH HOH . V 8 HOH B 7 207 90 HOH HOH . V 8 HOH B 8 208 108 HOH HOH . V 8 HOH B 9 209 82 HOH HOH . V 8 HOH B 10 210 113 HOH HOH . V 8 HOH B 11 211 131 HOH HOH . V 8 HOH B 12 212 116 HOH HOH . V 8 HOH B 13 213 137 HOH HOH . V 8 HOH B 14 214 78 HOH HOH . V 8 HOH B 15 215 152 HOH HOH . V 8 HOH B 16 216 96 HOH HOH . V 8 HOH B 17 217 134 HOH HOH . V 8 HOH B 18 218 101 HOH HOH . V 8 HOH B 19 219 130 HOH HOH . W 8 HOH C 1 301 68 HOH HOH . W 8 HOH C 2 302 73 HOH HOH . W 8 HOH C 3 303 153 HOH HOH . W 8 HOH C 4 304 146 HOH HOH . W 8 HOH C 5 305 55 HOH HOH . W 8 HOH C 6 306 100 HOH HOH . W 8 HOH C 7 307 141 HOH HOH . W 8 HOH C 8 308 14 HOH HOH . W 8 HOH C 9 309 1 HOH HOH . W 8 HOH C 10 310 50 HOH HOH . W 8 HOH C 11 311 18 HOH HOH . W 8 HOH C 12 312 79 HOH HOH . W 8 HOH C 13 313 7 HOH HOH . W 8 HOH C 14 314 24 HOH HOH . W 8 HOH C 15 315 23 HOH HOH . W 8 HOH C 16 316 29 HOH HOH . W 8 HOH C 17 317 69 HOH HOH . W 8 HOH C 18 318 26 HOH HOH . W 8 HOH C 19 319 115 HOH HOH . W 8 HOH C 20 320 109 HOH HOH . W 8 HOH C 21 321 66 HOH HOH . W 8 HOH C 22 322 171 HOH HOH . W 8 HOH C 23 323 16 HOH HOH . W 8 HOH C 24 324 138 HOH HOH . W 8 HOH C 25 325 2 HOH HOH . W 8 HOH C 26 326 93 HOH HOH . W 8 HOH C 27 327 31 HOH HOH . W 8 HOH C 28 328 168 HOH HOH . W 8 HOH C 29 329 30 HOH HOH . W 8 HOH C 30 330 40 HOH HOH . W 8 HOH C 31 331 60 HOH HOH . W 8 HOH C 32 332 87 HOH HOH . W 8 HOH C 33 333 11 HOH HOH . W 8 HOH C 34 334 4 HOH HOH . W 8 HOH C 35 335 65 HOH HOH . W 8 HOH C 36 336 159 HOH HOH . W 8 HOH C 37 337 114 HOH HOH . W 8 HOH C 38 338 44 HOH HOH . W 8 HOH C 39 339 111 HOH HOH . W 8 HOH C 40 340 136 HOH HOH . W 8 HOH C 41 341 62 HOH HOH . W 8 HOH C 42 342 86 HOH HOH . W 8 HOH C 43 343 3 HOH HOH . W 8 HOH C 44 344 80 HOH HOH . W 8 HOH C 45 345 174 HOH HOH . W 8 HOH C 46 346 5 HOH HOH . W 8 HOH C 47 347 81 HOH HOH . W 8 HOH C 48 348 129 HOH HOH . W 8 HOH C 49 349 8 HOH HOH . W 8 HOH C 50 350 110 HOH HOH . W 8 HOH C 51 351 58 HOH HOH . W 8 HOH C 52 352 104 HOH HOH . W 8 HOH C 53 353 102 HOH HOH . W 8 HOH C 54 354 92 HOH HOH . W 8 HOH C 55 355 51 HOH HOH . W 8 HOH C 56 356 133 HOH HOH . W 8 HOH C 57 357 173 HOH HOH . X 8 HOH D 1 301 63 HOH HOH . X 8 HOH D 2 302 99 HOH HOH . X 8 HOH D 3 303 21 HOH HOH . X 8 HOH D 4 304 9 HOH HOH . X 8 HOH D 5 305 128 HOH HOH . X 8 HOH D 6 306 75 HOH HOH . X 8 HOH D 7 307 22 HOH HOH . X 8 HOH D 8 308 145 HOH HOH . X 8 HOH D 9 309 12 HOH HOH . X 8 HOH D 10 310 172 HOH HOH . X 8 HOH D 11 311 122 HOH HOH . X 8 HOH D 12 312 6 HOH HOH . X 8 HOH D 13 313 156 HOH HOH . X 8 HOH D 14 314 39 HOH HOH . X 8 HOH D 15 315 43 HOH HOH . X 8 HOH D 16 316 162 HOH HOH . X 8 HOH D 17 317 88 HOH HOH . X 8 HOH D 18 318 147 HOH HOH . X 8 HOH D 19 319 107 HOH HOH . X 8 HOH D 20 320 150 HOH HOH . X 8 HOH D 21 321 61 HOH HOH . X 8 HOH D 22 322 35 HOH HOH . X 8 HOH D 23 323 48 HOH HOH . X 8 HOH D 24 324 89 HOH HOH . X 8 HOH D 25 325 154 HOH HOH . X 8 HOH D 26 326 49 HOH HOH . Y 8 HOH E 1 201 95 HOH HOH . Y 8 HOH E 2 202 13 HOH HOH . Y 8 HOH E 3 203 97 HOH HOH . Y 8 HOH E 4 204 103 HOH HOH . Y 8 HOH E 5 205 140 HOH HOH . Y 8 HOH E 6 206 98 HOH HOH . Y 8 HOH E 7 207 72 HOH HOH . Y 8 HOH E 8 208 76 HOH HOH . Y 8 HOH E 9 209 124 HOH HOH . Y 8 HOH E 10 210 121 HOH HOH . Y 8 HOH E 11 211 157 HOH HOH . Y 8 HOH E 12 212 70 HOH HOH . Y 8 HOH E 13 213 77 HOH HOH . Y 8 HOH E 14 214 123 HOH HOH . Y 8 HOH E 15 215 33 HOH HOH . Y 8 HOH E 16 216 19 HOH HOH . Y 8 HOH E 17 217 142 HOH HOH . Y 8 HOH E 18 218 94 HOH HOH . Z 8 HOH F 1 301 36 HOH HOH . Z 8 HOH F 2 302 105 HOH HOH . Z 8 HOH F 3 303 170 HOH HOH . Z 8 HOH F 4 304 45 HOH HOH . Z 8 HOH F 5 305 84 HOH HOH . Z 8 HOH F 6 306 20 HOH HOH . Z 8 HOH F 7 307 135 HOH HOH . Z 8 HOH F 8 308 132 HOH HOH . Z 8 HOH F 9 309 161 HOH HOH . Z 8 HOH F 10 310 112 HOH HOH . Z 8 HOH F 11 311 38 HOH HOH . Z 8 HOH F 12 312 15 HOH HOH . Z 8 HOH F 13 313 67 HOH HOH . Z 8 HOH F 14 314 74 HOH HOH . Z 8 HOH F 15 315 85 HOH HOH . Z 8 HOH F 16 316 46 HOH HOH . Z 8 HOH F 17 317 34 HOH HOH . Z 8 HOH F 18 318 155 HOH HOH . Z 8 HOH F 19 319 160 HOH HOH . Z 8 HOH F 20 320 158 HOH HOH . Z 8 HOH F 21 321 126 HOH HOH . Z 8 HOH F 22 322 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AZI . . . Q 5 -1.591 -47.168 43.579 1 41.76 ? N1 AZI 101 E 1 HETATM 2 N N2 AZI . . . Q 5 -0.596 -47.75 43.504 1 35.05 ? N2 AZI 101 E 1 HETATM 3 N N3 AZI . . . Q 5 0.358 -48.369 43.461 1 25.09 ? N3 AZI 101 E 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 3 #