data_9KWH # _model_server_result.job_id o2u-XLDKwme-fNQOw_MqRg _model_server_result.datetime_utc '2025-07-27 09:11:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9kwh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 9KWH # _exptl.entry_id 9KWH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 233.286 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description '(5~{S},6~{R})-5-methyl-7-thia-2-azatricyclo[6.3.1.0^{4,12}]dodeca-1(12),3,8,10-tetraene-6-carboxylic acid' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.65 _cell.angle_gamma 90 _cell.entry_id 9KWH _cell.length_a 184.6 _cell.length_b 66.52 _cell.length_c 99.5 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9KWH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1,2 B,E,H 2 1 C,F,I 2 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 4_546 -x+1/2,y-1/2,-z+1 -1 0 0 0 1 0 0 0 -1 72.207698 -33.26 97.450241 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C12 H11 N O2 S' _chem_comp.formula_weight 233.286 _chem_comp.id 9E0 _chem_comp.mon_nstd_flag . _chem_comp.name '(5~{S},6~{R})-5-methyl-7-thia-2-azatricyclo[6.3.1.0^{4,12}]dodeca-1(12),3,8,10-tetraene-6-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C11 9E0 doub 1 n n C12 C10 9E0 sing 2 n n C11 O02 9E0 sing 3 n n C11 C09 9E0 sing 4 n n S01 C09 9E0 sing 5 n n S01 C05 9E0 sing 6 n n C10 C09 9E0 sing 7 n n C10 C07 9E0 sing 8 n n C05 C02 9E0 doub 9 n y C05 C06 9E0 sing 10 n y C07 C06 9E0 sing 11 n y C07 C08 9E0 doub 12 n y C02 C01 9E0 sing 13 n y C06 C04 9E0 doub 14 n y C08 N01 9E0 sing 15 n y C01 C03 9E0 doub 16 n y C04 C03 9E0 sing 17 n y C04 N01 9E0 sing 18 n y C01 H1 9E0 sing 19 n n C02 H2 9E0 sing 20 n n C03 H3 9E0 sing 21 n n C08 H5 9E0 sing 22 n n C09 H7 9E0 sing 23 n n C10 H8 9E0 sing 24 n n C12 H9 9E0 sing 25 n n C12 H10 9E0 sing 26 n n C12 H11 9E0 sing 27 n n N01 H12 9E0 sing 28 n n O02 H13 9E0 sing 29 n n # _atom_sites.entry_id 9KWH _atom_sites.fract_transf_matrix[1][1] 0.005417 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001117 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 9E0 A 1 401 401 9E0 9E0 . E 2 9E0 B 1 401 401 9E0 9E0 . F 2 9E0 C 1 401 401 9E0 9E0 . G 3 HOH A 1 501 494 HOH HOH . G 3 HOH A 2 502 61 HOH HOH . G 3 HOH A 3 503 49 HOH HOH . G 3 HOH A 4 504 356 HOH HOH . G 3 HOH A 5 505 74 HOH HOH . G 3 HOH A 6 506 191 HOH HOH . G 3 HOH A 7 507 263 HOH HOH . G 3 HOH A 8 508 59 HOH HOH . G 3 HOH A 9 509 54 HOH HOH . G 3 HOH A 10 510 64 HOH HOH . G 3 HOH A 11 511 30 HOH HOH . G 3 HOH A 12 512 723 HOH HOH . G 3 HOH A 13 513 37 HOH HOH . G 3 HOH A 14 514 25 HOH HOH . G 3 HOH A 15 515 40 HOH HOH . G 3 HOH A 16 516 606 HOH HOH . G 3 HOH A 17 517 4 HOH HOH . G 3 HOH A 18 518 257 HOH HOH . G 3 HOH A 19 519 129 HOH HOH . G 3 HOH A 20 520 691 HOH HOH . G 3 HOH A 21 521 18 HOH HOH . G 3 HOH A 22 522 646 HOH HOH . G 3 HOH A 23 523 46 HOH HOH . G 3 HOH A 24 524 232 HOH HOH . G 3 HOH A 25 525 27 HOH HOH . G 3 HOH A 26 526 41 HOH HOH . G 3 HOH A 27 527 57 HOH HOH . G 3 HOH A 28 528 201 HOH HOH . G 3 HOH A 29 529 381 HOH HOH . G 3 HOH A 30 530 2 HOH HOH . G 3 HOH A 31 531 185 HOH HOH . G 3 HOH A 32 532 6 HOH HOH . G 3 HOH A 33 533 7 HOH HOH . G 3 HOH A 34 534 448 HOH HOH . G 3 HOH A 35 535 22 HOH HOH . G 3 HOH A 36 536 79 HOH HOH . G 3 HOH A 37 537 160 HOH HOH . G 3 HOH A 38 538 479 HOH HOH . G 3 HOH A 39 539 39 HOH HOH . G 3 HOH A 40 540 20 HOH HOH . G 3 HOH A 41 541 157 HOH HOH . G 3 HOH A 42 542 119 HOH HOH . G 3 HOH A 43 543 508 HOH HOH . G 3 HOH A 44 544 436 HOH HOH . G 3 HOH A 45 545 71 HOH HOH . G 3 HOH A 46 546 368 HOH HOH . G 3 HOH A 47 547 135 HOH HOH . G 3 HOH A 48 548 513 HOH HOH . G 3 HOH A 49 549 78 HOH HOH . G 3 HOH A 50 550 146 HOH HOH . G 3 HOH A 51 551 48 HOH HOH . G 3 HOH A 52 552 444 HOH HOH . G 3 HOH A 53 553 76 HOH HOH . G 3 HOH A 54 554 431 HOH HOH . G 3 HOH A 55 555 113 HOH HOH . G 3 HOH A 56 556 5 HOH HOH . G 3 HOH A 57 557 77 HOH HOH . G 3 HOH A 58 558 131 HOH HOH . G 3 HOH A 59 559 592 HOH HOH . G 3 HOH A 60 560 178 HOH HOH . G 3 HOH A 61 561 667 HOH HOH . G 3 HOH A 62 562 542 HOH HOH . H 3 HOH B 1 501 19 HOH HOH . H 3 HOH B 2 502 569 HOH HOH . H 3 HOH B 3 503 104 HOH HOH . H 3 HOH B 4 504 123 HOH HOH . H 3 HOH B 5 505 277 HOH HOH . H 3 HOH B 6 506 205 HOH HOH . H 3 HOH B 7 507 261 HOH HOH . H 3 HOH B 8 508 45 HOH HOH . H 3 HOH B 9 509 43 HOH HOH . H 3 HOH B 10 510 407 HOH HOH . H 3 HOH B 11 511 595 HOH HOH . H 3 HOH B 12 512 333 HOH HOH . H 3 HOH B 13 513 31 HOH HOH . H 3 HOH B 14 514 17 HOH HOH . H 3 HOH B 15 515 97 HOH HOH . H 3 HOH B 16 516 199 HOH HOH . H 3 HOH B 17 517 617 HOH HOH . H 3 HOH B 18 518 301 HOH HOH . H 3 HOH B 19 519 8 HOH HOH . H 3 HOH B 20 520 695 HOH HOH . H 3 HOH B 21 521 354 HOH HOH . H 3 HOH B 22 522 415 HOH HOH . H 3 HOH B 23 523 180 HOH HOH . H 3 HOH B 24 524 694 HOH HOH . H 3 HOH B 25 525 148 HOH HOH . H 3 HOH B 26 526 735 HOH HOH . I 3 HOH C 1 501 58 HOH HOH . I 3 HOH C 2 502 462 HOH HOH . I 3 HOH C 3 503 222 HOH HOH . I 3 HOH C 4 504 29 HOH HOH . I 3 HOH C 5 505 150 HOH HOH . I 3 HOH C 6 506 21 HOH HOH . I 3 HOH C 7 507 11 HOH HOH . I 3 HOH C 8 508 70 HOH HOH . I 3 HOH C 9 509 62 HOH HOH . I 3 HOH C 10 510 269 HOH HOH . I 3 HOH C 11 511 411 HOH HOH . I 3 HOH C 12 512 319 HOH HOH . I 3 HOH C 13 513 15 HOH HOH . I 3 HOH C 14 514 399 HOH HOH . I 3 HOH C 15 515 159 HOH HOH . I 3 HOH C 16 516 487 HOH HOH . I 3 HOH C 17 517 380 HOH HOH . I 3 HOH C 18 518 571 HOH HOH . I 3 HOH C 19 519 47 HOH HOH . I 3 HOH C 20 520 212 HOH HOH . I 3 HOH C 21 521 35 HOH HOH . I 3 HOH C 22 522 151 HOH HOH . I 3 HOH C 23 523 93 HOH HOH . I 3 HOH C 24 524 14 HOH HOH . I 3 HOH C 25 525 295 HOH HOH . I 3 HOH C 26 526 480 HOH HOH . I 3 HOH C 27 527 659 HOH HOH . I 3 HOH C 28 528 16 HOH HOH . I 3 HOH C 29 529 73 HOH HOH . I 3 HOH C 30 530 289 HOH HOH . I 3 HOH C 31 531 187 HOH HOH . I 3 HOH C 32 532 442 HOH HOH . I 3 HOH C 33 533 428 HOH HOH . I 3 HOH C 34 534 114 HOH HOH . I 3 HOH C 35 535 133 HOH HOH . I 3 HOH C 36 536 3 HOH HOH . I 3 HOH C 37 537 130 HOH HOH . I 3 HOH C 38 538 660 HOH HOH . I 3 HOH C 39 539 238 HOH HOH . I 3 HOH C 40 540 1 HOH HOH . I 3 HOH C 41 541 314 HOH HOH . I 3 HOH C 42 542 296 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 9E0 . . . F 2 51.747 41.904 29.343 1 70.11 ? C01 9E0 401 C 1 HETATM 2 C C02 9E0 . . . F 2 51.156 40.712 28.939 1 71.65 ? C02 9E0 401 C 1 HETATM 3 C C03 9E0 . . . F 2 52.402 42.007 30.564 1 67.28 ? C03 9E0 401 C 1 HETATM 4 C C04 9E0 . . . F 2 52.457 40.882 31.382 1 69.05 ? C04 9E0 401 C 1 HETATM 5 C C05 9E0 . . . F 2 51.21 39.584 29.76 1 72.01 ? C05 9E0 401 C 1 HETATM 6 C C06 9E0 . . . F 2 51.865 39.678 30.99 1 68.18 ? C06 9E0 401 C 1 HETATM 7 C C07 9E0 . . . F 2 52.072 38.723 32.034 1 69.91 ? C07 9E0 401 C 1 HETATM 8 C C08 9E0 . . . F 2 52.776 39.375 32.999 1 70.48 ? C08 9E0 401 C 1 HETATM 9 C C09 9E0 . . . F 2 50.201 37.403 31.008 1 76.8 ? C09 9E0 401 C 1 HETATM 10 C C10 9E0 . . . F 2 51.459 37.357 31.923 1 68.76 ? C10 9E0 401 C 1 HETATM 11 C C11 9E0 . . . F 2 49.522 36.039 30.925 1 82.11 ? C11 9E0 401 C 1 HETATM 12 C C12 9E0 . . . F 2 52.488 36.326 31.463 1 71.21 ? C12 9E0 401 C 1 HETATM 13 N N01 9E0 . . . F 2 53.016 40.675 32.626 1 68.89 ? N01 9E0 401 C 1 HETATM 14 O O01 9E0 . . . F 2 49.485 35.455 29.814 1 80.31 ? O01 9E0 401 C 1 HETATM 15 O O02 9E0 . . . F 2 49.046 35.605 32.004 1 84.32 ? O02 9E0 401 C 1 HETATM 16 S S01 9E0 . . . F 2 50.472 38.059 29.289 1 75.49 ? S01 9E0 401 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #