data_9LGL # _model_server_result.job_id '_EYxoRHYuLlQEhgn0UuSuQ' _model_server_result.datetime_utc '2025-07-06 14:31:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9lgl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 9LGL # _exptl.entry_id 9LGL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.46 _cell.angle_gamma 90 _cell.entry_id 9LGL _cell.length_a 52.329 _cell.length_b 110.933 _cell.length_c 73.016 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9LGL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,J 1 1 B,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 118 n n C1 C2 EDO sing 119 n n C1 H11 EDO sing 120 n n C1 H12 EDO sing 121 n n O1 HO1 EDO sing 122 n n C2 O2 EDO sing 123 n n C2 H21 EDO sing 124 n n C2 H22 EDO sing 125 n n O2 HO2 EDO sing 126 n n # _atom_sites.entry_id 9LGL _atom_sites.fract_transf_matrix[1][1] 0.01911 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006752 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009014 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1EJW A 1 401 401 A1EJW L0R . D 3 EDO A 1 402 501 EDO EDO . E 3 EDO A 1 403 701 EDO EDO . F 4 CL A 1 404 801 CL CL . G 3 EDO A 1 405 501 EDO EDO . H 3 EDO B 1 601 601 EDO EDO . I 2 A1EJW B 1 602 401 A1EJW L0R . J 5 HOH A 1 501 59 HOH HOH . J 5 HOH A 2 502 37 HOH HOH . J 5 HOH A 3 503 32 HOH HOH . J 5 HOH A 4 504 102 HOH HOH . J 5 HOH A 5 505 61 HOH HOH . J 5 HOH A 6 506 17 HOH HOH . J 5 HOH A 7 507 14 HOH HOH . J 5 HOH A 8 508 108 HOH HOH . J 5 HOH A 9 509 39 HOH HOH . J 5 HOH A 10 510 21 HOH HOH . J 5 HOH A 11 511 22 HOH HOH . J 5 HOH A 12 512 66 HOH HOH . J 5 HOH A 13 513 30 HOH HOH . J 5 HOH A 14 514 18 HOH HOH . J 5 HOH A 15 515 24 HOH HOH . J 5 HOH A 16 516 124 HOH HOH . J 5 HOH A 17 517 91 HOH HOH . J 5 HOH A 18 518 15 HOH HOH . J 5 HOH A 19 519 35 HOH HOH . J 5 HOH A 20 520 8 HOH HOH . J 5 HOH A 21 521 64 HOH HOH . J 5 HOH A 22 522 111 HOH HOH . J 5 HOH A 23 523 33 HOH HOH . J 5 HOH A 24 524 10 HOH HOH . J 5 HOH A 25 525 65 HOH HOH . J 5 HOH A 26 526 69 HOH HOH . J 5 HOH A 27 527 96 HOH HOH . J 5 HOH A 28 528 68 HOH HOH . J 5 HOH A 29 529 129 HOH HOH . J 5 HOH A 30 530 3 HOH HOH . J 5 HOH A 31 531 34 HOH HOH . J 5 HOH A 32 532 98 HOH HOH . J 5 HOH A 33 533 90 HOH HOH . J 5 HOH A 34 534 104 HOH HOH . J 5 HOH A 35 535 75 HOH HOH . J 5 HOH A 36 536 94 HOH HOH . J 5 HOH A 37 537 135 HOH HOH . J 5 HOH A 38 538 107 HOH HOH . J 5 HOH A 39 539 38 HOH HOH . J 5 HOH A 40 540 25 HOH HOH . J 5 HOH A 41 541 2 HOH HOH . J 5 HOH A 42 542 115 HOH HOH . J 5 HOH A 43 543 51 HOH HOH . J 5 HOH A 44 544 87 HOH HOH . J 5 HOH A 45 545 101 HOH HOH . J 5 HOH A 46 546 63 HOH HOH . J 5 HOH A 47 547 128 HOH HOH . J 5 HOH A 48 548 55 HOH HOH . J 5 HOH A 49 549 105 HOH HOH . J 5 HOH A 50 550 16 HOH HOH . J 5 HOH A 51 551 114 HOH HOH . J 5 HOH A 52 552 132 HOH HOH . J 5 HOH A 53 553 73 HOH HOH . J 5 HOH A 54 554 97 HOH HOH . J 5 HOH A 55 555 106 HOH HOH . J 5 HOH A 56 556 100 HOH HOH . J 5 HOH A 57 557 89 HOH HOH . J 5 HOH A 58 558 48 HOH HOH . J 5 HOH A 59 559 84 HOH HOH . J 5 HOH A 60 560 44 HOH HOH . J 5 HOH A 61 561 72 HOH HOH . J 5 HOH A 62 562 130 HOH HOH . J 5 HOH A 63 563 103 HOH HOH . J 5 HOH A 64 564 95 HOH HOH . J 5 HOH A 65 565 99 HOH HOH . J 5 HOH A 66 566 56 HOH HOH . J 5 HOH A 67 567 47 HOH HOH . J 5 HOH A 68 568 92 HOH HOH . J 5 HOH A 69 569 88 HOH HOH . J 5 HOH A 70 570 93 HOH HOH . J 5 HOH A 71 571 86 HOH HOH . K 5 HOH B 1 701 71 HOH HOH . K 5 HOH B 2 702 1 HOH HOH . K 5 HOH B 3 703 58 HOH HOH . K 5 HOH B 4 704 29 HOH HOH . K 5 HOH B 5 705 4 HOH HOH . K 5 HOH B 6 706 57 HOH HOH . K 5 HOH B 7 707 126 HOH HOH . K 5 HOH B 8 708 6 HOH HOH . K 5 HOH B 9 709 27 HOH HOH . K 5 HOH B 10 710 110 HOH HOH . K 5 HOH B 11 711 41 HOH HOH . K 5 HOH B 12 712 13 HOH HOH . K 5 HOH B 13 713 70 HOH HOH . K 5 HOH B 14 714 60 HOH HOH . K 5 HOH B 15 715 79 HOH HOH . K 5 HOH B 16 716 7 HOH HOH . K 5 HOH B 17 717 26 HOH HOH . K 5 HOH B 18 718 43 HOH HOH . K 5 HOH B 19 719 85 HOH HOH . K 5 HOH B 20 720 54 HOH HOH . K 5 HOH B 21 721 5 HOH HOH . K 5 HOH B 22 722 62 HOH HOH . K 5 HOH B 23 723 67 HOH HOH . K 5 HOH B 24 724 113 HOH HOH . K 5 HOH B 25 725 82 HOH HOH . K 5 HOH B 26 726 116 HOH HOH . K 5 HOH B 27 727 77 HOH HOH . K 5 HOH B 28 728 11 HOH HOH . K 5 HOH B 29 729 23 HOH HOH . K 5 HOH B 30 730 118 HOH HOH . K 5 HOH B 31 731 31 HOH HOH . K 5 HOH B 32 732 52 HOH HOH . K 5 HOH B 33 733 136 HOH HOH . K 5 HOH B 34 734 50 HOH HOH . K 5 HOH B 35 735 9 HOH HOH . K 5 HOH B 36 736 12 HOH HOH . K 5 HOH B 37 737 119 HOH HOH . K 5 HOH B 38 738 36 HOH HOH . K 5 HOH B 39 739 28 HOH HOH . K 5 HOH B 40 740 137 HOH HOH . K 5 HOH B 41 741 45 HOH HOH . K 5 HOH B 42 742 83 HOH HOH . K 5 HOH B 43 743 42 HOH HOH . K 5 HOH B 44 744 53 HOH HOH . K 5 HOH B 45 745 125 HOH HOH . K 5 HOH B 46 746 121 HOH HOH . K 5 HOH B 47 747 20 HOH HOH . K 5 HOH B 48 748 133 HOH HOH . K 5 HOH B 49 749 78 HOH HOH . K 5 HOH B 50 750 123 HOH HOH . K 5 HOH B 51 751 80 HOH HOH . K 5 HOH B 52 752 109 HOH HOH . K 5 HOH B 53 753 112 HOH HOH . K 5 HOH B 54 754 134 HOH HOH . K 5 HOH B 55 755 40 HOH HOH . K 5 HOH B 56 756 117 HOH HOH . K 5 HOH B 57 757 120 HOH HOH . K 5 HOH B 58 758 131 HOH HOH . K 5 HOH B 59 759 127 HOH HOH . K 5 HOH B 60 760 81 HOH HOH . K 5 HOH B 61 761 46 HOH HOH . K 5 HOH B 62 762 122 HOH HOH . K 5 HOH B 63 763 74 HOH HOH . K 5 HOH B 64 764 76 HOH HOH . K 5 HOH B 65 765 49 HOH HOH . K 5 HOH B 66 766 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 12.309 -30.213 17.898 1 57.16 ? C1 EDO 403 A 1 HETATM 2 O O1 EDO . . . E 3 13.401 -29.803 18.73 1 70.49 ? O1 EDO 403 A 1 HETATM 3 C C2 EDO . . . E 3 12.085 -29.237 16.751 1 52.03 ? C2 EDO 403 A 1 HETATM 4 O O2 EDO . . . E 3 13.284 -29.093 15.983 1 74.44 ? O2 EDO 403 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #