data_9LJU # _model_server_result.job_id w4EIL-0FwcKHCMuusTW8YQ _model_server_result.datetime_utc '2025-08-15 07:22:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9lju # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 9LJU # _exptl.entry_id 9LJU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9LJU _cell.length_a 139.313 _cell.length_b 139.313 _cell.length_c 93.14 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9LJU _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 221 A ASP 220 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc2 A OD1 ASP 221 A ASP 220 1_555 F MN MN . A MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc3 A O THR 222 A THR 221 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc4 A OD2 ASP 319 A ASP 318 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc5 A OD1 ASP 319 A ASP 318 1_555 F MN MN . A MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc6 A OD1 ASP 320 A ASP 319 1_555 F MN MN . A MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc7 D O1B GDP . A GDP 602 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc8 D O3A GDP . A GDP 602 1_555 E MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc9 D O1A GDP . A GDP 602 1_555 F MN MN . A MN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 119 n n PA O2A FAD sing 120 n n PA O5B FAD sing 121 n n PA O3P FAD sing 122 n n O2A HOA2 FAD sing 123 n n O5B C5B FAD sing 124 n n C5B C4B FAD sing 125 n n C5B H51A FAD sing 126 n n C5B H52A FAD sing 127 n n C4B O4B FAD sing 128 n n C4B C3B FAD sing 129 n n C4B H4B FAD sing 130 n n O4B C1B FAD sing 131 n n C3B O3B FAD sing 132 n n C3B C2B FAD sing 133 n n C3B H3B FAD sing 134 n n O3B HO3A FAD sing 135 n n C2B O2B FAD sing 136 n n C2B C1B FAD sing 137 n n C2B H2B FAD sing 138 n n O2B HO2A FAD sing 139 n n C1B N9A FAD sing 140 n n C1B H1B FAD sing 141 n n N9A C8A FAD sing 142 n y N9A C4A FAD sing 143 n y C8A N7A FAD doub 144 n y C8A H8A FAD sing 145 n n N7A C5A FAD sing 146 n y C5A C6A FAD sing 147 n y C5A C4A FAD doub 148 n y C6A N6A FAD sing 149 n n C6A N1A FAD doub 150 n y N6A H61A FAD sing 151 n n N6A H62A FAD sing 152 n n N1A C2A FAD sing 153 n y C2A N3A FAD doub 154 n y C2A H2A FAD sing 155 n n N3A C4A FAD sing 156 n y N1 C2 FAD sing 157 n n N1 C10 FAD doub 158 n n C2 O2 FAD doub 159 n n C2 N3 FAD sing 160 n n N3 C4 FAD sing 161 n n N3 HN3 FAD sing 162 n n C4 O4 FAD doub 163 n n C4 C4X FAD sing 164 n n C4X N5 FAD doub 165 n n C4X C10 FAD sing 166 n n N5 C5X FAD sing 167 n n C5X C6 FAD doub 168 n y C5X C9A FAD sing 169 n y C6 C7 FAD sing 170 n y C6 H6 FAD sing 171 n n C7 C7M FAD sing 172 n n C7 C8 FAD doub 173 n y C7M HM71 FAD sing 174 n n C7M HM72 FAD sing 175 n n C7M HM73 FAD sing 176 n n C8 C8M FAD sing 177 n n C8 C9 FAD sing 178 n y C8M HM81 FAD sing 179 n n C8M HM82 FAD sing 180 n n C8M HM83 FAD sing 181 n n C9 C9A FAD doub 182 n y C9 H9 FAD sing 183 n n C9A N10 FAD sing 184 n n N10 C10 FAD sing 185 n n N10 C1' FAD sing 186 n n C1' C2' FAD sing 187 n n C1' "H1'1" FAD sing 188 n n C1' "H1'2" FAD sing 189 n n C2' O2' FAD sing 190 n n C2' C3' FAD sing 191 n n C2' H2' FAD sing 192 n n O2' HO2' FAD sing 193 n n C3' O3' FAD sing 194 n n C3' C4' FAD sing 195 n n C3' H3' FAD sing 196 n n O3' HO3' FAD sing 197 n n C4' O4' FAD sing 198 n n C4' C5' FAD sing 199 n n C4' H4' FAD sing 200 n n O4' HO4' FAD sing 201 n n C5' O5' FAD sing 202 n n C5' "H5'1" FAD sing 203 n n C5' "H5'2" FAD sing 204 n n O5' P FAD sing 205 n n P O1P FAD doub 206 n n P O2P FAD sing 207 n n P O3P FAD sing 208 n n O2P HOP2 FAD sing 209 n n # _atom_sites.entry_id 9LJU _atom_sites.fract_transf_matrix[1][1] 0.007178 _atom_sites.fract_transf_matrix[1][2] 0.004144 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008289 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010737 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 601 604 FAD FAD . D 4 GDP A 1 602 603 GDP GDP . E 5 MN A 1 603 3 MN MN . F 5 MN A 1 604 4 MN MN . G 6 HOH A 1 701 19 HOH HOH . G 6 HOH A 2 702 21 HOH HOH . G 6 HOH A 3 703 5 HOH HOH . G 6 HOH A 4 704 75 HOH HOH . G 6 HOH A 5 705 45 HOH HOH . G 6 HOH A 6 706 35 HOH HOH . G 6 HOH A 7 707 11 HOH HOH . G 6 HOH A 8 708 95 HOH HOH . G 6 HOH A 9 709 74 HOH HOH . G 6 HOH A 10 710 7 HOH HOH . G 6 HOH A 11 711 53 HOH HOH . G 6 HOH A 12 712 3 HOH HOH . G 6 HOH A 13 713 62 HOH HOH . G 6 HOH A 14 714 54 HOH HOH . G 6 HOH A 15 715 39 HOH HOH . G 6 HOH A 16 716 2 HOH HOH . G 6 HOH A 17 717 32 HOH HOH . G 6 HOH A 18 718 1 HOH HOH . G 6 HOH A 19 719 78 HOH HOH . G 6 HOH A 20 720 23 HOH HOH . G 6 HOH A 21 721 68 HOH HOH . G 6 HOH A 22 722 24 HOH HOH . G 6 HOH A 23 723 6 HOH HOH . G 6 HOH A 24 724 10 HOH HOH . G 6 HOH A 25 725 18 HOH HOH . G 6 HOH A 26 726 37 HOH HOH . G 6 HOH A 27 727 94 HOH HOH . G 6 HOH A 28 728 28 HOH HOH . G 6 HOH A 29 729 96 HOH HOH . G 6 HOH A 30 730 38 HOH HOH . G 6 HOH A 31 731 63 HOH HOH . G 6 HOH A 32 732 46 HOH HOH . G 6 HOH A 33 733 56 HOH HOH . G 6 HOH A 34 734 41 HOH HOH . G 6 HOH A 35 735 42 HOH HOH . G 6 HOH A 36 736 20 HOH HOH . G 6 HOH A 37 737 57 HOH HOH . G 6 HOH A 38 738 73 HOH HOH . G 6 HOH A 39 739 72 HOH HOH . G 6 HOH A 40 740 80 HOH HOH . G 6 HOH A 41 741 49 HOH HOH . G 6 HOH A 42 742 70 HOH HOH . G 6 HOH A 43 743 44 HOH HOH . G 6 HOH A 44 744 40 HOH HOH . G 6 HOH A 45 745 82 HOH HOH . G 6 HOH A 46 746 67 HOH HOH . G 6 HOH A 47 747 65 HOH HOH . G 6 HOH A 48 748 69 HOH HOH . G 6 HOH A 49 749 66 HOH HOH . G 6 HOH A 50 750 47 HOH HOH . G 6 HOH A 51 751 92 HOH HOH . G 6 HOH A 52 752 51 HOH HOH . G 6 HOH A 53 753 91 HOH HOH . G 6 HOH A 54 754 79 HOH HOH . G 6 HOH A 55 755 81 HOH HOH . G 6 HOH A 56 756 64 HOH HOH . G 6 HOH A 57 757 83 HOH HOH . G 6 HOH A 58 758 71 HOH HOH . H 6 HOH T 1 101 85 HOH HOH . H 6 HOH T 2 102 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 3 65.462 -17.565 23.249 1 74.52 ? PA FAD 601 A 1 HETATM 2 O O1A FAD . . . C 3 65.716 -18.49 24.4 1 66.34 ? O1A FAD 601 A 1 HETATM 3 O O2A FAD . . . C 3 63.999 -17.728 22.755 1 54.4 ? O2A FAD 601 A 1 HETATM 4 O O5B FAD . . . C 3 65.693 -15.985 23.751 1 69.5 ? O5B FAD 601 A 1 HETATM 5 C C5B FAD . . . C 3 66.028 -15.677 25.044 1 63.87 ? C5B FAD 601 A 1 HETATM 6 C C4B FAD . . . C 3 65.481 -14.259 25.452 1 56.43 ? C4B FAD 601 A 1 HETATM 7 O O4B FAD . . . C 3 65.481 -13.423 24.432 1 57.29 ? O4B FAD 601 A 1 HETATM 8 C C3B FAD . . . C 3 64.026 -14.356 25.895 1 54.28 ? C3B FAD 601 A 1 HETATM 9 O O3B FAD . . . C 3 63.993 -14.457 27.242 1 52.51 ? O3B FAD 601 A 1 HETATM 10 C C2B FAD . . . C 3 63.363 -13.03 25.427 1 52.92 ? C2B FAD 601 A 1 HETATM 11 O O2B FAD . . . C 3 63.437 -11.945 26.485 1 52.48 ? O2B FAD 601 A 1 HETATM 12 C C1B FAD . . . C 3 64.048 -12.656 24.39 1 55.01 ? C1B FAD 601 A 1 HETATM 13 N N9A FAD . . . C 3 63.288 -12.949 23.136 1 52.08 ? N9A FAD 601 A 1 HETATM 14 C C8A FAD . . . C 3 63.078 -14.13 22.563 1 52.1 ? C8A FAD 601 A 1 HETATM 15 N N7A FAD . . . C 3 62.343 -13.942 21.437 1 50.45 ? N7A FAD 601 A 1 HETATM 16 C C5A FAD . . . C 3 62.108 -12.628 21.34 1 50.78 ? C5A FAD 601 A 1 HETATM 17 C C6A FAD . . . C 3 61.417 -11.903 20.399 1 46.16 ? C6A FAD 601 A 1 HETATM 18 N N6A FAD . . . C 3 60.703 -12.285 19.188 1 46.93 ? N6A FAD 601 A 1 HETATM 19 N N1A FAD . . . C 3 61.312 -10.586 20.511 1 44.57 ? N1A FAD 601 A 1 HETATM 20 C C2A FAD . . . C 3 61.893 -9.941 21.553 1 44.31 ? C2A FAD 601 A 1 HETATM 21 N N3A FAD . . . C 3 62.58 -10.657 22.487 1 47.38 ? N3A FAD 601 A 1 HETATM 22 C C4A FAD . . . C 3 62.68 -11.996 22.375 1 51.87 ? C4A FAD 601 A 1 HETATM 23 N N1 FAD . . . C 3 62.504 -13.755 15.426 1 54.22 ? N1 FAD 601 A 1 HETATM 24 C C2 FAD . . . C 3 61.706 -13.708 14.168 1 72.67 ? C2 FAD 601 A 1 HETATM 25 O O2 FAD . . . C 3 61.412 -14.761 13.596 1 84.35 ? O2 FAD 601 A 1 HETATM 26 N N3 FAD . . . C 3 61.246 -12.371 13.578 1 69.48 ? N3 FAD 601 A 1 HETATM 27 C C4 FAD . . . C 3 61.601 -11.151 14.264 1 60.42 ? C4 FAD 601 A 1 HETATM 28 O O4 FAD . . . C 3 61.27 -10.079 13.84 1 61.62 ? O4 FAD 601 A 1 HETATM 29 C C4X FAD . . . C 3 62.423 -11.22 15.56 1 48.62 ? C4X FAD 601 A 1 HETATM 30 N N5 FAD . . . C 3 62.776 -9.972 16.229 1 44.23 ? N5 FAD 601 A 1 HETATM 31 C C5X FAD . . . C 3 63.579 -10.036 17.491 1 48.4 ? C5X FAD 601 A 1 HETATM 32 C C6 FAD . . . C 3 63.913 -8.824 18.148 1 44.38 ? C6 FAD 601 A 1 HETATM 33 C C7 FAD . . . C 3 64.662 -8.842 19.328 1 42.53 ? C7 FAD 601 A 1 HETATM 34 C C7M FAD . . . C 3 64.905 -7.411 19.832 1 38.1 ? C7M FAD 601 A 1 HETATM 35 C C8 FAD . . . C 3 65.082 -10.071 19.878 1 47.58 ? C8 FAD 601 A 1 HETATM 36 C C8M FAD . . . C 3 65.909 -10.185 21.175 1 46.29 ? C8M FAD 601 A 1 HETATM 37 C C9 FAD . . . C 3 64.745 -11.294 19.228 1 45.44 ? C9 FAD 601 A 1 HETATM 38 C C9A FAD . . . C 3 63.992 -11.272 18.032 1 49.18 ? C9A FAD 601 A 1 HETATM 39 N N10 FAD . . . C 3 63.617 -12.572 17.316 1 50.16 ? N10 FAD 601 A 1 HETATM 40 C C10 FAD . . . C 3 62.849 -12.508 16.103 1 49.79 ? C10 FAD 601 A 1 HETATM 41 C C1' FAD . . . C 3 64.04 -13.913 17.82 1 60.4 ? C1' FAD 601 A 1 HETATM 42 C C2' FAD . . . C 3 65.508 -14.158 17.498 1 62.03 ? C2' FAD 601 A 1 HETATM 43 O O2' FAD . . . C 3 65.78 -13.832 16.193 1 55.87 ? O2' FAD 601 A 1 HETATM 44 C C3' FAD . . . C 3 66.015 -15.621 17.72 1 66.2 ? C3' FAD 601 A 1 HETATM 45 O O3' FAD . . . C 3 65.149 -16.581 17.203 1 64.67 ? O3' FAD 601 A 1 HETATM 46 C C4' FAD . . . C 3 66.355 -15.894 19.182 1 67.42 ? C4' FAD 601 A 1 HETATM 47 O O4' FAD . . . C 3 65.812 -14.968 20.078 1 64.22 ? O4' FAD 601 A 1 HETATM 48 C C5' FAD . . . C 3 67.88 -15.82 19.332 1 73.23 ? C5' FAD 601 A 1 HETATM 49 O O5' FAD . . . C 3 68.321 -16.99 20.011 1 81.05 ? O5' FAD 601 A 1 HETATM 50 P P FAD . . . C 3 68.02 -17.126 21.652 1 77.63 ? P FAD 601 A 1 HETATM 51 O O1P FAD . . . C 3 69.162 -17.999 22.174 1 74.27 ? O1P FAD 601 A 1 HETATM 52 O O2P FAD . . . C 3 68.098 -15.701 22.291 1 68.06 ? O2P FAD 601 A 1 HETATM 53 O O3P FAD . . . C 3 66.533 -17.863 21.935 1 70.35 ? O3P FAD 601 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 53 #