data_9LJW
#
_model_server_result.job_id            vBJ9k585HRa8tghIgPjHwg 
_model_server_result.datetime_utc      '2025-08-15 07:21:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9ljw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":101}' 
#
_entry.id    9LJW 
#
_exptl.entry_id    9LJW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9LJW 
_cell.length_a            142.606 
_cell.length_b            142.606 
_cell.length_c            91.63 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9LJW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C P G 1 C G 1 1_555 G O3B FAD . C FAD 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.563 ? 
metalc ? metalc1 B OD2 ASP 221 A ASP 220 1_555 F MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc2 B O THR 222 A THR 221 1_555 F MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc3 B OD1 ASP 319 A ASP 318 1_555 E MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc4 B OD2 ASP 319 A ASP 318 1_555 F MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? 
metalc ? metalc5 B OD2 ASP 320 A ASP 319 1_555 E MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc6 D O1A GDP . A GDP 601 1_555 E MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc7 D O1B GDP . A GDP 601 1_555 F MN MN . A MN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
hydrog WATSON-CRICK hydrog1 A N1 G 2 T G 3 1_555 C N3 C 3 C C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N2 G 2 T G 3 1_555 C O2 C 3 C C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O6 G 2 T G 3 1_555 C N4 C 3 C C 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N3 U 3 T U 4 1_555 C N1 A 2 C A 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A O4 U 3 T U 4 1_555 C N6 A 2 C A 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A N3 C 4 T C 5 1_555 C N1 G 1 C G 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N4 C 4 T C 5 1_555 C O6 G 1 C G 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A O2 C 4 T C 5 1_555 C N2 G 1 C G 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 158 n n 
PA O2A FAD sing 159 n n 
PA O5B FAD sing 160 n n 
PA O3P FAD sing 161 n n 
O2A HOA2 FAD sing 162 n n 
O5B C5B FAD sing 163 n n 
C5B C4B FAD sing 164 n n 
C5B H51A FAD sing 165 n n 
C5B H52A FAD sing 166 n n 
C4B O4B FAD sing 167 n n 
C4B C3B FAD sing 168 n n 
C4B H4B FAD sing 169 n n 
O4B C1B FAD sing 170 n n 
C3B O3B FAD sing 171 n n 
C3B C2B FAD sing 172 n n 
C3B H3B FAD sing 173 n n 
O3B HO3A FAD sing 174 n n 
C2B O2B FAD sing 175 n n 
C2B C1B FAD sing 176 n n 
C2B H2B FAD sing 177 n n 
O2B HO2A FAD sing 178 n n 
C1B N9A FAD sing 179 n n 
C1B H1B FAD sing 180 n n 
N9A C8A FAD sing 181 n y 
N9A C4A FAD sing 182 n y 
C8A N7A FAD doub 183 n y 
C8A H8A FAD sing 184 n n 
N7A C5A FAD sing 185 n y 
C5A C6A FAD sing 186 n y 
C5A C4A FAD doub 187 n y 
C6A N6A FAD sing 188 n n 
C6A N1A FAD doub 189 n y 
N6A H61A FAD sing 190 n n 
N6A H62A FAD sing 191 n n 
N1A C2A FAD sing 192 n y 
C2A N3A FAD doub 193 n y 
C2A H2A FAD sing 194 n n 
N3A C4A FAD sing 195 n y 
N1 C2 FAD sing 196 n n 
N1 C10 FAD doub 197 n n 
C2 O2 FAD doub 198 n n 
C2 N3 FAD sing 199 n n 
N3 C4 FAD sing 200 n n 
N3 HN3 FAD sing 201 n n 
C4 O4 FAD doub 202 n n 
C4 C4X FAD sing 203 n n 
C4X N5 FAD doub 204 n n 
C4X C10 FAD sing 205 n n 
N5 C5X FAD sing 206 n n 
C5X C6 FAD doub 207 n y 
C5X C9A FAD sing 208 n y 
C6 C7 FAD sing 209 n y 
C6 H6 FAD sing 210 n n 
C7 C7M FAD sing 211 n n 
C7 C8 FAD doub 212 n y 
C7M HM71 FAD sing 213 n n 
C7M HM72 FAD sing 214 n n 
C7M HM73 FAD sing 215 n n 
C8 C8M FAD sing 216 n n 
C8 C9 FAD sing 217 n y 
C8M HM81 FAD sing 218 n n 
C8M HM82 FAD sing 219 n n 
C8M HM83 FAD sing 220 n n 
C9 C9A FAD doub 221 n y 
C9 H9 FAD sing 222 n n 
C9A N10 FAD sing 223 n n 
N10 C10 FAD sing 224 n n 
N10 C1' FAD sing 225 n n 
C1' C2' FAD sing 226 n n 
C1' "H1'1" FAD sing 227 n n 
C1' "H1'2" FAD sing 228 n n 
C2' O2' FAD sing 229 n n 
C2' C3' FAD sing 230 n n 
C2' H2' FAD sing 231 n n 
O2' HO2' FAD sing 232 n n 
C3' O3' FAD sing 233 n n 
C3' C4' FAD sing 234 n n 
C3' H3' FAD sing 235 n n 
O3' HO3' FAD sing 236 n n 
C4' O4' FAD sing 237 n n 
C4' C5' FAD sing 238 n n 
C4' H4' FAD sing 239 n n 
O4' HO4' FAD sing 240 n n 
C5' O5' FAD sing 241 n n 
C5' "H5'1" FAD sing 242 n n 
C5' "H5'2" FAD sing 243 n n 
O5' P FAD sing 244 n n 
P O1P FAD doub 245 n n 
P O2P FAD sing 246 n n 
P O3P FAD sing 247 n n 
O2P HOP2 FAD sing 248 n n 
#
_atom_sites.entry_id                     9LJW 
_atom_sites.fract_transf_matrix[1][1]    0.007012 
_atom_sites.fract_transf_matrix[1][2]    0.004049 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008097 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010913 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 GDP A 1 601 603 GDP GDP . 
E 5 MN A 1 602 604 MN MN . 
F 5 MN A 1 603 605 MN MN . 
G 6 FAD C 1 101 604 FAD FAD . 
H 7 HOH A 1 701 2 HOH HOH . 
H 7 HOH A 2 702 6 HOH HOH . 
H 7 HOH A 3 703 4 HOH HOH . 
H 7 HOH A 4 704 5 HOH HOH . 
I 7 HOH C 1 201 3 HOH HOH . 
I 7 HOH C 2 202 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . G 6 -63.044 18.242 -6.342 1 119.15 ? PA FAD 101 C 1 
HETATM 2 O O1A FAD . . . G 6 -63.405 19.325 -7.336 1 115.68 ? O1A FAD 101 C 1 
HETATM 3 O O2A FAD . . . G 6 -62.506 18.546 -4.971 1 113.65 ? O2A FAD 101 C 1 
HETATM 4 O O5B FAD . . . G 6 -64.47 17.481 -6.195 1 109.44 ? O5B FAD 101 C 1 
HETATM 5 C C5B FAD . . . G 6 -65.031 17.605 -4.917 1 109.77 ? C5B FAD 101 C 1 
HETATM 6 C C4B FAD . . . G 6 -66.158 18.627 -4.878 1 102.91 ? C4B FAD 101 C 1 
HETATM 7 O O4B FAD . . . G 6 -67.299 17.954 -5.425 1 111.88 ? O4B FAD 101 C 1 
HETATM 8 C C3B FAD . . . G 6 -66.501 19.03 -3.432 1 104.51 ? C3B FAD 101 C 1 
HETATM 9 O O3B FAD . . . G 6 -66.158 20.37 -3.095 1 97.68 ? O3B FAD 101 C 1 
HETATM 10 C C2B FAD . . . G 6 -68 18.715 -3.298 1 102.83 ? C2B FAD 101 C 1 
HETATM 11 O O2B FAD . . . G 6 -68.823 19.843 -3.187 1 89.68 ? O2B FAD 101 C 1 
HETATM 12 C C1B FAD . . . G 6 -68.276 17.717 -4.439 1 112.3 ? C1B FAD 101 C 1 
HETATM 13 N N9A FAD . . . G 6 -68.256 16.371 -3.869 1 118.54 ? N9A FAD 101 C 1 
HETATM 14 C C8A FAD . . . G 6 -67.19 15.509 -3.706 1 114.59 ? C8A FAD 101 C 1 
HETATM 15 N N7A FAD . . . G 6 -67.482 14.387 -3.117 1 118.76 ? N7A FAD 101 C 1 
HETATM 16 C C5A FAD . . . G 6 -68.829 14.49 -2.845 1 125 ? C5A FAD 101 C 1 
HETATM 17 C C6A FAD . . . G 6 -69.762 13.62 -2.222 1 121.21 ? C6A FAD 101 C 1 
HETATM 18 N N6A FAD . . . G 6 -69.436 12.412 -1.746 1 114.54 ? N6A FAD 101 C 1 
HETATM 19 N N1A FAD . . . G 6 -71.036 14.037 -2.116 1 121.8 ? N1A FAD 101 C 1 
HETATM 20 C C2A FAD . . . G 6 -71.374 15.239 -2.59 1 124.93 ? C2A FAD 101 C 1 
HETATM 21 N N3A FAD . . . G 6 -70.598 16.136 -3.183 1 127.04 ? N3A FAD 101 C 1 
HETATM 22 C C4A FAD . . . G 6 -69.327 15.717 -3.294 1 125.49 ? C4A FAD 101 C 1 
HETATM 23 N N1 FAD . . . G 6 -66.795 12.456 -6.806 1 150.84 ? N1 FAD 101 C 1 
HETATM 24 C C2 FAD . . . G 6 -66.452 11.229 -6.323 1 149.78 ? C2 FAD 101 C 1 
HETATM 25 O O2 FAD . . . G 6 -65.323 10.778 -6.447 1 144.53 ? O2 FAD 101 C 1 
HETATM 26 N N3 FAD . . . G 6 -67.451 10.476 -5.663 1 151.99 ? N3 FAD 101 C 1 
HETATM 27 C C4 FAD . . . G 6 -68.766 10.835 -5.44 1 150.98 ? C4 FAD 101 C 1 
HETATM 28 O O4 FAD . . . G 6 -69.577 10.127 -4.858 1 146.9 ? O4 FAD 101 C 1 
HETATM 29 C C4X FAD . . . G 6 -69.101 12.188 -5.987 1 148.22 ? C4X FAD 101 C 1 
HETATM 30 N N5 FAD . . . G 6 -70.313 12.646 -5.844 1 138.71 ? N5 FAD 101 C 1 
HETATM 31 C C5X FAD . . . G 6 -70.598 13.88 -6.346 1 140.41 ? C5X FAD 101 C 1 
HETATM 32 C C6 FAD . . . G 6 -71.913 14.374 -6.179 1 138.72 ? C6 FAD 101 C 1 
HETATM 33 C C7 FAD . . . G 6 -72.287 15.611 -6.656 1 135.85 ? C7 FAD 101 C 1 
HETATM 34 C C7M FAD . . . G 6 -73.69 16.106 -6.47 1 123.27 ? C7M FAD 101 C 1 
HETATM 35 C C8 FAD . . . G 6 -71.306 16.409 -7.33 1 129.25 ? C8 FAD 101 C 1 
HETATM 36 C C8M FAD . . . G 6 -71.668 17.763 -7.862 1 104.01 ? C8M FAD 101 C 1 
HETATM 37 C C9 FAD . . . G 6 -70.009 15.945 -7.501 1 129.44 ? C9 FAD 101 C 1 
HETATM 38 C C9A FAD . . . G 6 -69.611 14.677 -7.02 1 138.92 ? C9A FAD 101 C 1 
HETATM 39 N N10 FAD . . . G 6 -68.323 14.15 -7.169 1 143.82 ? N10 FAD 101 C 1 
HETATM 40 C C10 FAD . . . G 6 -68.023 12.914 -6.656 1 150.73 ? C10 FAD 101 C 1 
HETATM 41 C C1' FAD . . . G 6 -67.2 14.863 -7.823 1 137.45 ? C1' FAD 101 C 1 
HETATM 42 C C2' FAD . . . G 6 -66.921 14.638 -9.329 1 141.72 ? C2' FAD 101 C 1 
HETATM 43 O O2' FAD . . . G 6 -67.208 13.315 -9.71 1 147.73 ? O2' FAD 101 C 1 
HETATM 44 C C3' FAD . . . G 6 -65.463 15.014 -9.71 1 138.65 ? C3' FAD 101 C 1 
HETATM 45 O O3' FAD . . . G 6 -64.621 13.91 -9.412 1 141.3 ? O3' FAD 101 C 1 
HETATM 46 C C4' FAD . . . G 6 -64.935 16.285 -9.015 1 126.6 ? C4' FAD 101 C 1 
HETATM 47 O O4' FAD . . . G 6 -65.97 17.237 -8.994 1 117.96 ? O4' FAD 101 C 1 
HETATM 48 C C5' FAD . . . G 6 -63.699 16.834 -9.728 1 134.42 ? C5' FAD 101 C 1 
HETATM 49 O O5' FAD . . . G 6 -62.508 16.186 -9.283 1 148.95 ? O5' FAD 101 C 1 
HETATM 50 P P FAD . . . G 6 -61.296 16.989 -8.495 1 152.14 ? P FAD 101 C 1 
HETATM 51 O O1P FAD . . . G 6 -60.122 16.056 -8.426 1 128.72 ? O1P FAD 101 C 1 
HETATM 52 O O2P FAD . . . G 6 -61.179 18.376 -9.069 1 126.54 ? O2P FAD 101 C 1 
HETATM 53 O O3P FAD . . . G 6 -61.954 17.18 -6.966 1 131.63 ? O3P FAD 101 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           53 
#