data_9MEA
#
_model_server_result.job_id            xWTjAEKwFnlpwF0D3XghIg 
_model_server_result.datetime_utc      '2025-01-10 20:19:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9mea 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":502}' 
#
_entry.id    9MEA 
#
_exptl.entry_id    9MEA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9MEA 
_cell.length_a            87.527 
_cell.length_b            87.527 
_cell.length_c            475.639 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9MEA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 K N N 
? 4 L N N 
? 4 O N N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     9MEA 
_atom_sites.fract_transf_matrix[1][1]    0.011425 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011425 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002102 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FBP A 1 501 201 FBP FBP . 
F 3 PO4 A 1 502 302 PO4 PO4 . 
G 4 AMP B 1 501 104 AMP AMP . 
H 2 FBP B 1 502 202 FBP FBP . 
I 3 PO4 B 1 503 303 PO4 PO4 . 
J 3 PO4 B 1 504 304 PO4 PO4 . 
K 4 AMP C 1 501 101 AMP AMP . 
L 4 AMP C 1 502 103 AMP AMP . 
M 2 FBP C 1 503 203 FBP FBP . 
N 3 PO4 C 1 504 301 PO4 PO4 . 
O 4 AMP D 1 501 102 AMP AMP . 
P 2 FBP D 1 502 204 FBP FBP . 
Q 5 HOH A 1 601 1 HOH HOH . 
Q 5 HOH A 2 602 2 HOH HOH . 
R 5 HOH B 1 601 5 HOH HOH . 
R 5 HOH B 2 602 9 HOH HOH . 
R 5 HOH B 3 603 8 HOH HOH . 
R 5 HOH B 4 604 4 HOH HOH . 
S 5 HOH C 1 601 7 HOH HOH . 
S 5 HOH C 2 602 11 HOH HOH . 
S 5 HOH C 3 603 10 HOH HOH . 
S 5 HOH C 4 604 3 HOH HOH . 
T 5 HOH D 1 601 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . L 4 44.076 -35.161 -48.368 1 86.78 ? P AMP 502 C 1 
HETATM 2 O O1P AMP . . . L 4 42.691 -35.644 -48.723 1 77.91 ? O1P AMP 502 C 1 
HETATM 3 O O2P AMP . . . L 4 44.871 -34.666 -49.557 1 62.81 ? O2P AMP 502 C 1 
HETATM 4 O O3P AMP . . . L 4 44.825 -36.085 -47.432 1 77.92 ? O3P AMP 502 C 1 
HETATM 5 O O5' AMP . . . L 4 43.782 -33.861 -47.489 1 76.69 ? O5' AMP 502 C 1 
HETATM 6 C C5' AMP . . . L 4 42.57 -33.745 -46.747 1 72.08 ? C5' AMP 502 C 1 
HETATM 7 C C4' AMP . . . L 4 42.368 -32.355 -46.182 1 69.44 ? C4' AMP 502 C 1 
HETATM 8 O O4' AMP . . . L 4 43.416 -32.064 -45.216 1 68.83 ? O4' AMP 502 C 1 
HETATM 9 C C3' AMP . . . L 4 42.398 -31.21 -47.194 1 67.45 ? C3' AMP 502 C 1 
HETATM 10 O O3' AMP . . . L 4 41.435 -30.22 -46.817 1 62.18 ? O3' AMP 502 C 1 
HETATM 11 C C2' AMP . . . L 4 43.821 -30.662 -47.053 1 61.21 ? C2' AMP 502 C 1 
HETATM 12 O O2' AMP . . . L 4 43.97 -29.313 -47.437 1 62.55 ? O2' AMP 502 C 1 
HETATM 13 C C1' AMP . . . L 4 44.071 -30.856 -45.563 1 61.21 ? C1' AMP 502 C 1 
HETATM 14 N N9 AMP . . . L 4 45.473 -30.997 -45.168 1 60.35 ? N9 AMP 502 C 1 
HETATM 15 C C8 AMP . . . L 4 46.411 -31.704 -45.824 1 61.18 ? C8 AMP 502 C 1 
HETATM 16 N N7 AMP . . . L 4 47.596 -31.651 -45.166 1 58.92 ? N7 AMP 502 C 1 
HETATM 17 C C5 AMP . . . L 4 47.414 -30.906 -44.056 1 59.99 ? C5 AMP 502 C 1 
HETATM 18 C C6 AMP . . . L 4 48.258 -30.457 -42.923 1 56.47 ? C6 AMP 502 C 1 
HETATM 19 N N6 AMP . . . L 4 49.559 -30.83 -42.885 1 54.44 ? N6 AMP 502 C 1 
HETATM 20 N N1 AMP . . . L 4 47.69 -29.687 -41.963 1 53.74 ? N1 AMP 502 C 1 
HETATM 21 C C2 AMP . . . L 4 46.393 -29.327 -42.02 1 55.82 ? C2 AMP 502 C 1 
HETATM 22 N N3 AMP . . . L 4 45.569 -29.701 -43.022 1 62.06 ? N3 AMP 502 C 1 
HETATM 23 C C4 AMP . . . L 4 46.009 -30.477 -44.054 1 62.38 ? C4 AMP 502 C 1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#