data_9MHG # _model_server_result.job_id 1kRbDiHsK5JkBLQ6mSnAwA _model_server_result.datetime_utc '2025-03-25 15:52:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9mhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2003}' # _entry.id 9MHG # _exptl.entry_id 9MHG _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 228.371 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9MHG _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9MHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N GLY 2 A GLY 2 1_555 H C1 MYR . A MYR 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? metalc ? metalc1 A NZ LYS 53 A LYS 53 1_555 G MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc2 A OD1 ASN 153 A ASN 153 1_555 G MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc3 A OD2 ASP 166 A ASP 166 1_555 G MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc4 F O3B GTP . A GTP 2001 1_555 G MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc5 F O1B GTP . A GTP 2001 1_555 G MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc6 F O2A GTP . A GTP 2001 1_555 G MG MG . A MG 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.703 ? metalc ? metalc7 E OG SER 46 E SER 25 1_555 J MG MG . E MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc8 E OG1 THR 64 E THR 43 1_555 J MG MG . E MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc9 I O2B GTP . E GTP 1000 1_555 J MG MG . E MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 285 n n C1 O2 MYR sing 286 n n C1 C2 MYR sing 287 n n O2 HO2 MYR sing 288 n n C2 C3 MYR sing 289 n n C2 H21 MYR sing 290 n n C2 H22 MYR sing 291 n n C3 C4 MYR sing 292 n n C3 H31 MYR sing 293 n n C3 H32 MYR sing 294 n n C4 C5 MYR sing 295 n n C4 H41 MYR sing 296 n n C4 H42 MYR sing 297 n n C5 C6 MYR sing 298 n n C5 H51 MYR sing 299 n n C5 H52 MYR sing 300 n n C6 C7 MYR sing 301 n n C6 H61 MYR sing 302 n n C6 H62 MYR sing 303 n n C7 C8 MYR sing 304 n n C7 H71 MYR sing 305 n n C7 H72 MYR sing 306 n n C8 C9 MYR sing 307 n n C8 H81 MYR sing 308 n n C8 H82 MYR sing 309 n n C9 C10 MYR sing 310 n n C9 H91 MYR sing 311 n n C9 H92 MYR sing 312 n n C10 C11 MYR sing 313 n n C10 H101 MYR sing 314 n n C10 H102 MYR sing 315 n n C11 C12 MYR sing 316 n n C11 H111 MYR sing 317 n n C11 H112 MYR sing 318 n n C12 C13 MYR sing 319 n n C12 H121 MYR sing 320 n n C12 H122 MYR sing 321 n n C13 C14 MYR sing 322 n n C13 H131 MYR sing 323 n n C13 H132 MYR sing 324 n n C14 H141 MYR sing 325 n n C14 H142 MYR sing 326 n n C14 H143 MYR sing 327 n n # _atom_sites.entry_id 9MHG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 GTP A 1 2001 2001 GTP GTP . G 7 MG A 1 2002 2002 MG MG . H 8 MYR A 1 2003 2011 MYR MYR . I 6 GTP E 1 1000 1000 GTP GTP . J 7 MG E 1 1001 1001 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . H 8 211.479 135.849 181.756 1 107.34 ? C1 MYR 2003 A 1 HETATM 2 O O1 MYR . . . H 8 211.221 135.683 180.547 1 111.4 ? O1 MYR 2003 A 1 HETATM 3 C C2 MYR . . . H 8 211.106 137.218 182.359 1 92.43 ? C2 MYR 2003 A 1 HETATM 4 C C3 MYR . . . H 8 212.232 137.879 183.136 1 81.44 ? C3 MYR 2003 A 1 HETATM 5 C C4 MYR . . . H 8 211.877 139.266 183.648 1 74.63 ? C4 MYR 2003 A 1 HETATM 6 C C5 MYR . . . H 8 213.04 139.964 184.339 1 65.85 ? C5 MYR 2003 A 1 HETATM 7 C C6 MYR . . . H 8 212.781 141.442 184.588 1 62.83 ? C6 MYR 2003 A 1 HETATM 8 C C7 MYR . . . H 8 211.982 141.722 185.85 1 65.41 ? C7 MYR 2003 A 1 HETATM 9 C C8 MYR . . . H 8 211.917 143.207 186.173 1 58.91 ? C8 MYR 2003 A 1 HETATM 10 C C9 MYR . . . H 8 211.509 143.47 187.612 1 57.06 ? C9 MYR 2003 A 1 HETATM 11 C C10 MYR . . . H 8 211.607 144.922 188.046 1 47.76 ? C10 MYR 2003 A 1 HETATM 12 C C11 MYR . . . H 8 211.545 145.075 189.555 1 54.85 ? C11 MYR 2003 A 1 HETATM 13 C C12 MYR . . . H 8 210.15 144.854 190.113 1 61.71 ? C12 MYR 2003 A 1 HETATM 14 C C13 MYR . . . H 8 210.101 144.891 191.633 1 66.1 ? C13 MYR 2003 A 1 HETATM 15 C C14 MYR . . . H 8 208.719 144.622 192.206 1 68.52 ? C14 MYR 2003 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 15 #