data_9MIF
#
_model_server_result.job_id            GF1nDWhrzXCl902A479E6w 
_model_server_result.datetime_utc      '2025-09-08 22:50:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9mif 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":202}' 
#
_entry.id    9MIF 
#
_exptl.entry_id    9MIF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9MIF 
_cell.length_a            53.005 
_cell.length_b            74.44 
_cell.length_c            208.115 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9MIF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 102 H CYS 98 1_555 A SG CYS 107 H CYS 100 1_555 ? ? ? C ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf3 A SG CYS 150 H CYS 140 1_555 A SG CYS 206 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf4 B SG CYS 23 L CYS 23 1_555 B SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf5 B SG CYS 130 L CYS 134 1_555 B SG CYS 190 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf6 C SG CYS 7 C CYS 7 1_555 C SG CYS 158 C CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
disulf ? disulf7 C SG CYS 15 C CYS 15 1_555 C SG CYS 151 C CYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
disulf ? disulf8 C SG CYS 51 C CYS 51 1_555 C SG CYS 88 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf9 C SG CYS 99 C CYS 99 1_555 C SG CYS 105 C CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
covale ? covale1 C ND2 ASN 18 C ASN 18 1_555 D C1 NAG . C NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale2 C ND2 ASN 65 C ASN 65 1_555 E C1 NAG . C NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     9MIF 
_atom_sites.fract_transf_matrix[1][1]    0.018866 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013434 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004805 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NAG C 1 201 1 NAG NAG . 
E 4 NAG C 1 202 2 NAG NAG . 
F 5 HOH H 1 301 6 HOH HOH . 
F 5 HOH H 2 302 48 HOH HOH . 
F 5 HOH H 3 303 114 HOH HOH . 
F 5 HOH H 4 304 65 HOH HOH . 
F 5 HOH H 5 305 90 HOH HOH . 
F 5 HOH H 6 306 123 HOH HOH . 
F 5 HOH H 7 307 43 HOH HOH . 
F 5 HOH H 8 308 60 HOH HOH . 
F 5 HOH H 9 309 53 HOH HOH . 
F 5 HOH H 10 310 91 HOH HOH . 
F 5 HOH H 11 311 64 HOH HOH . 
F 5 HOH H 12 312 54 HOH HOH . 
F 5 HOH H 13 313 17 HOH HOH . 
F 5 HOH H 14 314 84 HOH HOH . 
F 5 HOH H 15 315 49 HOH HOH . 
F 5 HOH H 16 316 36 HOH HOH . 
F 5 HOH H 17 317 74 HOH HOH . 
F 5 HOH H 18 318 103 HOH HOH . 
F 5 HOH H 19 319 104 HOH HOH . 
F 5 HOH H 20 320 18 HOH HOH . 
F 5 HOH H 21 321 124 HOH HOH . 
F 5 HOH H 22 322 22 HOH HOH . 
F 5 HOH H 23 323 41 HOH HOH . 
F 5 HOH H 24 324 83 HOH HOH . 
F 5 HOH H 25 325 125 HOH HOH . 
F 5 HOH H 26 326 67 HOH HOH . 
F 5 HOH H 27 327 86 HOH HOH . 
F 5 HOH H 28 328 82 HOH HOH . 
F 5 HOH H 29 329 47 HOH HOH . 
F 5 HOH H 30 330 127 HOH HOH . 
F 5 HOH H 31 331 63 HOH HOH . 
F 5 HOH H 32 332 75 HOH HOH . 
F 5 HOH H 33 333 45 HOH HOH . 
F 5 HOH H 34 334 51 HOH HOH . 
F 5 HOH H 35 335 9 HOH HOH . 
F 5 HOH H 36 336 79 HOH HOH . 
F 5 HOH H 37 337 109 HOH HOH . 
F 5 HOH H 38 338 72 HOH HOH . 
F 5 HOH H 39 339 57 HOH HOH . 
F 5 HOH H 40 340 101 HOH HOH . 
F 5 HOH H 41 341 115 HOH HOH . 
F 5 HOH H 42 342 73 HOH HOH . 
F 5 HOH H 43 343 89 HOH HOH . 
G 5 HOH L 1 301 71 HOH HOH . 
G 5 HOH L 2 302 59 HOH HOH . 
G 5 HOH L 3 303 12 HOH HOH . 
G 5 HOH L 4 304 112 HOH HOH . 
G 5 HOH L 5 305 66 HOH HOH . 
G 5 HOH L 6 306 78 HOH HOH . 
G 5 HOH L 7 307 32 HOH HOH . 
G 5 HOH L 8 308 119 HOH HOH . 
G 5 HOH L 9 309 107 HOH HOH . 
G 5 HOH L 10 310 46 HOH HOH . 
G 5 HOH L 11 311 39 HOH HOH . 
G 5 HOH L 12 312 122 HOH HOH . 
G 5 HOH L 13 313 40 HOH HOH . 
G 5 HOH L 14 314 11 HOH HOH . 
G 5 HOH L 15 315 70 HOH HOH . 
G 5 HOH L 16 316 96 HOH HOH . 
G 5 HOH L 17 317 117 HOH HOH . 
G 5 HOH L 18 318 44 HOH HOH . 
G 5 HOH L 19 319 68 HOH HOH . 
H 5 HOH C 1 301 92 HOH HOH . 
H 5 HOH C 2 302 94 HOH HOH . 
H 5 HOH C 3 303 97 HOH HOH . 
H 5 HOH C 4 304 26 HOH HOH . 
H 5 HOH C 5 305 13 HOH HOH . 
H 5 HOH C 6 306 31 HOH HOH . 
H 5 HOH C 7 307 118 HOH HOH . 
H 5 HOH C 8 308 7 HOH HOH . 
H 5 HOH C 9 309 110 HOH HOH . 
H 5 HOH C 10 310 108 HOH HOH . 
H 5 HOH C 11 311 16 HOH HOH . 
H 5 HOH C 12 312 27 HOH HOH . 
H 5 HOH C 13 313 8 HOH HOH . 
H 5 HOH C 14 314 55 HOH HOH . 
H 5 HOH C 15 315 28 HOH HOH . 
H 5 HOH C 16 316 33 HOH HOH . 
H 5 HOH C 17 317 35 HOH HOH . 
H 5 HOH C 18 318 58 HOH HOH . 
H 5 HOH C 19 319 19 HOH HOH . 
H 5 HOH C 20 320 10 HOH HOH . 
H 5 HOH C 21 321 61 HOH HOH . 
H 5 HOH C 22 322 88 HOH HOH . 
H 5 HOH C 23 323 113 HOH HOH . 
H 5 HOH C 24 324 37 HOH HOH . 
H 5 HOH C 25 325 5 HOH HOH . 
H 5 HOH C 26 326 3 HOH HOH . 
H 5 HOH C 27 327 1 HOH HOH . 
H 5 HOH C 28 328 111 HOH HOH . 
H 5 HOH C 29 329 34 HOH HOH . 
H 5 HOH C 30 330 38 HOH HOH . 
H 5 HOH C 31 331 116 HOH HOH . 
H 5 HOH C 32 332 100 HOH HOH . 
H 5 HOH C 33 333 102 HOH HOH . 
H 5 HOH C 34 334 105 HOH HOH . 
H 5 HOH C 35 335 76 HOH HOH . 
H 5 HOH C 36 336 14 HOH HOH . 
H 5 HOH C 37 337 29 HOH HOH . 
H 5 HOH C 38 338 30 HOH HOH . 
H 5 HOH C 39 339 20 HOH HOH . 
H 5 HOH C 40 340 15 HOH HOH . 
H 5 HOH C 41 341 50 HOH HOH . 
H 5 HOH C 42 342 120 HOH HOH . 
H 5 HOH C 43 343 95 HOH HOH . 
H 5 HOH C 44 344 77 HOH HOH . 
H 5 HOH C 45 345 21 HOH HOH . 
H 5 HOH C 46 346 23 HOH HOH . 
H 5 HOH C 47 347 2 HOH HOH . 
H 5 HOH C 48 348 121 HOH HOH . 
H 5 HOH C 49 349 25 HOH HOH . 
H 5 HOH C 50 350 98 HOH HOH . 
H 5 HOH C 51 351 106 HOH HOH . 
H 5 HOH C 52 352 80 HOH HOH . 
H 5 HOH C 53 353 87 HOH HOH . 
H 5 HOH C 54 354 4 HOH HOH . 
H 5 HOH C 55 355 62 HOH HOH . 
H 5 HOH C 56 356 42 HOH HOH . 
H 5 HOH C 57 357 81 HOH HOH . 
H 5 HOH C 58 358 69 HOH HOH . 
H 5 HOH C 59 359 85 HOH HOH . 
H 5 HOH C 60 360 52 HOH HOH . 
H 5 HOH C 61 361 24 HOH HOH . 
H 5 HOH C 62 362 93 HOH HOH . 
H 5 HOH C 63 363 128 HOH HOH . 
H 5 HOH C 64 364 99 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . E 4 -7.884 25.081 0.773 1 30.92 ? C1 NAG 202 C 1 
HETATM 2 C C2 NAG . . . E 4 -7.986 26.086 -0.385 1 31.66 ? C2 NAG 202 C 1 
HETATM 3 C C3 NAG . . . E 4 -7.793 27.528 0.083 1 32.64 ? C3 NAG 202 C 1 
HETATM 4 C C4 NAG . . . E 4 -8.675 27.839 1.284 1 32.49 ? C4 NAG 202 C 1 
HETATM 5 C C5 NAG . . . E 4 -8.374 26.819 2.38 1 32.36 ? C5 NAG 202 C 1 
HETATM 6 C C6 NAG . . . E 4 -9.222 26.995 3.619 1 31.34 ? C6 NAG 202 C 1 
HETATM 7 C C7 NAG . . . E 4 -7.208 25.924 -2.717 1 31.91 ? C7 NAG 202 C 1 
HETATM 8 C C8 NAG . . . E 4 -6.039 25.52 -3.58 1 31.33 ? C8 NAG 202 C 1 
HETATM 9 N N2 NAG . . . E 4 -7.014 25.769 -1.396 1 31.83 ? N2 NAG 202 C 1 
HETATM 10 O O3 NAG . . . E 4 -8.07 28.378 -0.999 1 32.84 ? O3 NAG 202 C 1 
HETATM 11 O O4 NAG . . . E 4 -8.372 29.151 1.7 1 32.96 ? O4 NAG 202 C 1 
HETATM 12 O O5 NAG . . . E 4 -8.631 25.525 1.884 1 31.09 ? O5 NAG 202 C 1 
HETATM 13 O O6 NAG . . . E 4 -10.585 26.851 3.296 1 29.46 ? O6 NAG 202 C 1 
HETATM 14 O O7 NAG . . . E 4 -8.243 26.357 -3.202 1 31.91 ? O7 NAG 202 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#