data_9MJQ # _model_server_result.job_id RRXf6K16aENSsjp5sJUfrg _model_server_result.datetime_utc '2025-01-23 06:57:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9mjq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 9MJQ # _exptl.entry_id 9MJQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 268.226 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description INOSINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9MJQ _cell.length_a 92.821 _cell.length_b 92.821 _cell.length_c 130.152 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9MJQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 46.4105 -80.385344 0 3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 92.821 0 0 4 'crystal symmetry operation' 10_545 y+2/3,x-2/3,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 92.821 -53.590229 43.384 5 'crystal symmetry operation' 11_445 x-y-1/3,-y-2/3,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 -53.590229 43.384 6 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 46.4105 26.795115 43.384 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H12 N4 O5' _chem_comp.formula_weight 268.226 _chem_comp.id NOS _chem_comp.mon_nstd_flag . _chem_comp.name INOSINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 NOS sing 237 n n N1 C6 NOS sing 238 n n C2 N3 NOS doub 239 n n O6 C6 NOS doub 240 n n C6 C5 NOS sing 241 n n N3 C4 NOS sing 242 n n O2' C2' NOS sing 243 n n C5 C4 NOS doub 244 n y C5 N7 NOS sing 245 n y C4 N9 NOS sing 246 n y N7 C8 NOS doub 247 n y N9 C8 NOS sing 248 n y N9 C1' NOS sing 249 n n C1' C2' NOS sing 250 n n C1' O4' NOS sing 251 n n C2' C3' NOS sing 252 n n O4' C4' NOS sing 253 n n C3' O3' NOS sing 254 n n C3' C4' NOS sing 255 n n C4' C5' NOS sing 256 n n C5' O5' NOS sing 257 n n C2 H1 NOS sing 258 n n N1 H2 NOS sing 259 n n C8 H3 NOS sing 260 n n C5' H4 NOS sing 261 n n C5' H5 NOS sing 262 n n O5' H6 NOS sing 263 n n C4' H7 NOS sing 264 n n C1' H8 NOS sing 265 n n C2' H9 NOS sing 266 n n O2' H10 NOS sing 267 n n C3' H11 NOS sing 268 n n O3' H12 NOS sing 269 n n # _atom_sites.entry_id 9MJQ _atom_sites.fract_transf_matrix[1][1] 0.010773 _atom_sites.fract_transf_matrix[1][2] 0.00622 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01244 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007683 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NOS A 1 301 301 NOS NOS . C 3 CL A 1 302 1 CL CL . D 3 CL A 1 303 2 CL CL . E 3 CL A 1 304 3 CL CL . F 4 HOH A 1 401 113 HOH HOH . F 4 HOH A 2 402 66 HOH HOH . F 4 HOH A 3 403 101 HOH HOH . F 4 HOH A 4 404 88 HOH HOH . F 4 HOH A 5 405 193 HOH HOH . F 4 HOH A 6 406 159 HOH HOH . F 4 HOH A 7 407 90 HOH HOH . F 4 HOH A 8 408 163 HOH HOH . F 4 HOH A 9 409 161 HOH HOH . F 4 HOH A 10 410 59 HOH HOH . F 4 HOH A 11 411 137 HOH HOH . F 4 HOH A 12 412 173 HOH HOH . F 4 HOH A 13 413 108 HOH HOH . F 4 HOH A 14 414 95 HOH HOH . F 4 HOH A 15 415 180 HOH HOH . F 4 HOH A 16 416 105 HOH HOH . F 4 HOH A 17 417 54 HOH HOH . F 4 HOH A 18 418 157 HOH HOH . F 4 HOH A 19 419 107 HOH HOH . F 4 HOH A 20 420 120 HOH HOH . F 4 HOH A 21 421 175 HOH HOH . F 4 HOH A 22 422 154 HOH HOH . F 4 HOH A 23 423 99 HOH HOH . F 4 HOH A 24 424 92 HOH HOH . F 4 HOH A 25 425 1 HOH HOH . F 4 HOH A 26 426 47 HOH HOH . F 4 HOH A 27 427 30 HOH HOH . F 4 HOH A 28 428 33 HOH HOH . F 4 HOH A 29 429 114 HOH HOH . F 4 HOH A 30 430 15 HOH HOH . F 4 HOH A 31 431 17 HOH HOH . F 4 HOH A 32 432 135 HOH HOH . F 4 HOH A 33 433 156 HOH HOH . F 4 HOH A 34 434 98 HOH HOH . F 4 HOH A 35 435 49 HOH HOH . F 4 HOH A 36 436 56 HOH HOH . F 4 HOH A 37 437 103 HOH HOH . F 4 HOH A 38 438 65 HOH HOH . F 4 HOH A 39 439 153 HOH HOH . F 4 HOH A 40 440 19 HOH HOH . F 4 HOH A 41 441 40 HOH HOH . F 4 HOH A 42 442 58 HOH HOH . F 4 HOH A 43 443 11 HOH HOH . F 4 HOH A 44 444 69 HOH HOH . F 4 HOH A 45 445 6 HOH HOH . F 4 HOH A 46 446 9 HOH HOH . F 4 HOH A 47 447 186 HOH HOH . F 4 HOH A 48 448 71 HOH HOH . F 4 HOH A 49 449 121 HOH HOH . F 4 HOH A 50 450 110 HOH HOH . F 4 HOH A 51 451 41 HOH HOH . F 4 HOH A 52 452 31 HOH HOH . F 4 HOH A 53 453 20 HOH HOH . F 4 HOH A 54 454 151 HOH HOH . F 4 HOH A 55 455 38 HOH HOH . F 4 HOH A 56 456 196 HOH HOH . F 4 HOH A 57 457 36 HOH HOH . F 4 HOH A 58 458 76 HOH HOH . F 4 HOH A 59 459 35 HOH HOH . F 4 HOH A 60 460 8 HOH HOH . F 4 HOH A 61 461 34 HOH HOH . F 4 HOH A 62 462 189 HOH HOH . F 4 HOH A 63 463 60 HOH HOH . F 4 HOH A 64 464 55 HOH HOH . F 4 HOH A 65 465 5 HOH HOH . F 4 HOH A 66 466 136 HOH HOH . F 4 HOH A 67 467 64 HOH HOH . F 4 HOH A 68 468 171 HOH HOH . F 4 HOH A 69 469 43 HOH HOH . F 4 HOH A 70 470 117 HOH HOH . F 4 HOH A 71 471 44 HOH HOH . F 4 HOH A 72 472 104 HOH HOH . F 4 HOH A 73 473 13 HOH HOH . F 4 HOH A 74 474 61 HOH HOH . F 4 HOH A 75 475 188 HOH HOH . F 4 HOH A 76 476 96 HOH HOH . F 4 HOH A 77 477 79 HOH HOH . F 4 HOH A 78 478 87 HOH HOH . F 4 HOH A 79 479 149 HOH HOH . F 4 HOH A 80 480 14 HOH HOH . F 4 HOH A 81 481 93 HOH HOH . F 4 HOH A 82 482 42 HOH HOH . F 4 HOH A 83 483 25 HOH HOH . F 4 HOH A 84 484 46 HOH HOH . F 4 HOH A 85 485 84 HOH HOH . F 4 HOH A 86 486 24 HOH HOH . F 4 HOH A 87 487 75 HOH HOH . F 4 HOH A 88 488 50 HOH HOH . F 4 HOH A 89 489 32 HOH HOH . F 4 HOH A 90 490 37 HOH HOH . F 4 HOH A 91 491 129 HOH HOH . F 4 HOH A 92 492 68 HOH HOH . F 4 HOH A 93 493 23 HOH HOH . F 4 HOH A 94 494 138 HOH HOH . F 4 HOH A 95 495 115 HOH HOH . F 4 HOH A 96 496 26 HOH HOH . F 4 HOH A 97 497 77 HOH HOH . F 4 HOH A 98 498 45 HOH HOH . F 4 HOH A 99 499 109 HOH HOH . F 4 HOH A 100 500 72 HOH HOH . F 4 HOH A 101 501 57 HOH HOH . F 4 HOH A 102 502 194 HOH HOH . F 4 HOH A 103 503 29 HOH HOH . F 4 HOH A 104 504 63 HOH HOH . F 4 HOH A 105 505 12 HOH HOH . F 4 HOH A 106 506 27 HOH HOH . F 4 HOH A 107 507 125 HOH HOH . F 4 HOH A 108 508 83 HOH HOH . F 4 HOH A 109 509 81 HOH HOH . F 4 HOH A 110 510 21 HOH HOH . F 4 HOH A 111 511 4 HOH HOH . F 4 HOH A 112 512 16 HOH HOH . F 4 HOH A 113 513 48 HOH HOH . F 4 HOH A 114 514 150 HOH HOH . F 4 HOH A 115 515 80 HOH HOH . F 4 HOH A 116 516 39 HOH HOH . F 4 HOH A 117 517 168 HOH HOH . F 4 HOH A 118 518 28 HOH HOH . F 4 HOH A 119 519 127 HOH HOH . F 4 HOH A 120 520 131 HOH HOH . F 4 HOH A 121 521 124 HOH HOH . F 4 HOH A 122 522 91 HOH HOH . F 4 HOH A 123 523 106 HOH HOH . F 4 HOH A 124 524 74 HOH HOH . F 4 HOH A 125 525 139 HOH HOH . F 4 HOH A 126 526 183 HOH HOH . F 4 HOH A 127 527 82 HOH HOH . F 4 HOH A 128 528 73 HOH HOH . F 4 HOH A 129 529 52 HOH HOH . F 4 HOH A 130 530 126 HOH HOH . F 4 HOH A 131 531 51 HOH HOH . F 4 HOH A 132 532 2 HOH HOH . F 4 HOH A 133 533 172 HOH HOH . F 4 HOH A 134 534 116 HOH HOH . F 4 HOH A 135 535 102 HOH HOH . F 4 HOH A 136 536 152 HOH HOH . F 4 HOH A 137 537 97 HOH HOH . F 4 HOH A 138 538 133 HOH HOH . F 4 HOH A 139 539 122 HOH HOH . F 4 HOH A 140 540 78 HOH HOH . F 4 HOH A 141 541 119 HOH HOH . F 4 HOH A 142 542 165 HOH HOH . F 4 HOH A 143 543 100 HOH HOH . F 4 HOH A 144 544 166 HOH HOH . F 4 HOH A 145 545 169 HOH HOH . F 4 HOH A 146 546 155 HOH HOH . F 4 HOH A 147 547 167 HOH HOH . F 4 HOH A 148 548 176 HOH HOH . F 4 HOH A 149 549 70 HOH HOH . F 4 HOH A 150 550 130 HOH HOH . F 4 HOH A 151 551 85 HOH HOH . F 4 HOH A 152 552 184 HOH HOH . F 4 HOH A 153 553 140 HOH HOH . F 4 HOH A 154 554 112 HOH HOH . F 4 HOH A 155 555 147 HOH HOH . F 4 HOH A 156 556 89 HOH HOH . F 4 HOH A 157 557 191 HOH HOH . F 4 HOH A 158 558 181 HOH HOH . F 4 HOH A 159 559 7 HOH HOH . F 4 HOH A 160 560 170 HOH HOH . F 4 HOH A 161 561 146 HOH HOH . F 4 HOH A 162 562 142 HOH HOH . F 4 HOH A 163 563 178 HOH HOH . F 4 HOH A 164 564 132 HOH HOH . F 4 HOH A 165 565 94 HOH HOH . F 4 HOH A 166 566 144 HOH HOH . F 4 HOH A 167 567 160 HOH HOH . F 4 HOH A 168 568 158 HOH HOH . F 4 HOH A 169 569 195 HOH HOH . F 4 HOH A 170 570 145 HOH HOH . F 4 HOH A 171 571 190 HOH HOH . F 4 HOH A 172 572 174 HOH HOH . F 4 HOH A 173 573 179 HOH HOH . F 4 HOH A 174 574 197 HOH HOH . F 4 HOH A 175 575 182 HOH HOH . F 4 HOH A 176 576 111 HOH HOH . F 4 HOH A 177 577 192 HOH HOH . F 4 HOH A 178 578 10 HOH HOH . F 4 HOH A 179 579 164 HOH HOH . F 4 HOH A 180 580 187 HOH HOH . F 4 HOH A 181 581 123 HOH HOH . F 4 HOH A 182 582 67 HOH HOH . F 4 HOH A 183 583 118 HOH HOH . F 4 HOH A 184 584 134 HOH HOH . F 4 HOH A 185 585 3 HOH HOH . F 4 HOH A 186 586 18 HOH HOH . F 4 HOH A 187 587 162 HOH HOH . F 4 HOH A 188 588 141 HOH HOH . F 4 HOH A 189 589 128 HOH HOH . F 4 HOH A 190 590 185 HOH HOH . F 4 HOH A 191 591 143 HOH HOH . F 4 HOH A 192 592 148 HOH HOH . F 4 HOH A 193 593 86 HOH HOH . F 4 HOH A 194 594 177 HOH HOH . F 4 HOH A 195 595 22 HOH HOH . F 4 HOH A 196 596 62 HOH HOH . F 4 HOH A 197 597 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N9 NOS . . . B 2 27.525 -9.633 12.141 1 13.47 ? N9 NOS 301 A 1 HETATM 2 C C4 NOS . . . B 2 28.608 -10.384 11.753 1 13.33 ? C4 NOS 301 A 1 HETATM 3 N N3 NOS . . . B 2 29.68 -10.762 12.485 1 14.03 ? N3 NOS 301 A 1 HETATM 4 C C2 NOS . . . B 2 30.539 -11.481 11.83 1 13.54 ? C2 NOS 301 A 1 HETATM 5 N N1 NOS . . . B 2 30.407 -11.828 10.532 1 13.76 ? N1 NOS 301 A 1 HETATM 6 C C6 NOS . . . B 2 29.327 -11.515 9.703 1 14.72 ? C6 NOS 301 A 1 HETATM 7 O O6 NOS . . . B 2 29.286 -11.901 8.54 1 16.65 ? O6 NOS 301 A 1 HETATM 8 C C5 NOS . . . B 2 28.389 -10.706 10.419 1 13.95 ? C5 NOS 301 A 1 HETATM 9 N N7 NOS . . . B 2 27.217 -10.172 9.989 1 14.69 ? N7 NOS 301 A 1 HETATM 10 C C8 NOS . . . B 2 26.749 -9.562 11.025 1 14.45 ? C8 NOS 301 A 1 HETATM 11 C C5' NOS . . . B 2 29.673 -7.076 12.779 1 13.87 ? C5' NOS 301 A 1 HETATM 12 O O5' NOS . . . B 2 29.269 -6.191 11.747 1 14.96 ? O5' NOS 301 A 1 HETATM 13 C C4' NOS . . . B 2 28.618 -7.197 13.85 1 12.88 ? C4' NOS 301 A 1 HETATM 14 O O4' NOS . . . B 2 27.363 -7.57 13.24 1 13.63 ? O4' NOS 301 A 1 HETATM 15 C C1' NOS . . . B 2 27.155 -8.953 13.402 1 13.75 ? C1' NOS 301 A 1 HETATM 16 C C2' NOS . . . B 2 27.917 -9.381 14.657 1 14.66 ? C2' NOS 301 A 1 HETATM 17 O O2' NOS . . . B 2 27.004 -9.586 15.715 1 17.25 ? O2' NOS 301 A 1 HETATM 18 C C3' NOS . . . B 2 28.9 -8.228 14.931 1 13.72 ? C3' NOS 301 A 1 HETATM 19 O O3' NOS . . . B 2 28.635 -7.662 16.213 1 14.3 ? O3' NOS 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 19 #