data_9MLT
#
_model_server_result.job_id            3wfiuEOOaJtHiKEneieyPw 
_model_server_result.datetime_utc      '2025-08-28 00:10:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9mlt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    9MLT 
#
_exptl.entry_id    9MLT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              442.427 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[2-({4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)-4-cyanophenyl]acetic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9MLT 
_cell.length_a            134.013 
_cell.length_b            134.013 
_cell.length_c            75.56 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9MLT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C23 H18 N6 O4' 
_chem_comp.formula_weight    442.427 
_chem_comp.id                OFD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[2-({4-[(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)-4-cyanophenyl]acetic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N4 C1 OFD sing 317 n n 
N2 C1 OFD doub 318 n n 
N2 C2 OFD sing 319 n n 
C1 N1 OFD sing 320 n n 
N3 C2 OFD sing 321 n y 
N3 C6 OFD sing 322 n y 
C2 C3 OFD doub 323 n y 
O2 C14 OFD doub 324 n n 
N1 C4 OFD sing 325 n n 
C10 C9 OFD doub 326 n y 
C10 C11 OFD sing 327 n y 
C6 C5 OFD doub 328 n y 
C22 C16 OFD sing 329 n n 
C22 C23 OFD sing 330 n n 
C3 C4 OFD sing 331 n n 
C3 C5 OFD sing 332 n y 
C9 C8 OFD sing 333 n y 
C14 C11 OFD sing 334 n n 
C14 N5 OFD sing 335 n n 
C4 O1 OFD doub 336 n n 
O3 C23 OFD doub 337 n n 
C17 C16 OFD doub 338 n y 
C17 C18 OFD sing 339 n y 
C16 C15 OFD sing 340 n y 
C5 C7 OFD sing 341 n n 
C23 O4 OFD sing 342 n n 
C11 C12 OFD doub 343 n y 
C18 C19 OFD doub 344 n y 
C15 N5 OFD sing 345 n n 
C15 C20 OFD doub 346 n y 
C8 C7 OFD sing 347 n n 
C8 C13 OFD doub 348 n y 
C19 C20 OFD sing 349 n y 
C19 C21 OFD sing 350 n n 
C12 C13 OFD sing 351 n y 
C21 N6 OFD trip 352 n n 
C6 H1 OFD sing 353 n n 
C7 H2 OFD sing 354 n n 
C7 H3 OFD sing 355 n n 
C9 H4 OFD sing 356 n n 
C10 H5 OFD sing 357 n n 
C12 H6 OFD sing 358 n n 
C13 H7 OFD sing 359 n n 
C17 H8 OFD sing 360 n n 
C18 H9 OFD sing 361 n n 
C20 H10 OFD sing 362 n n 
C22 H11 OFD sing 363 n n 
C22 H12 OFD sing 364 n n 
N1 H13 OFD sing 365 n n 
N3 H14 OFD sing 366 n n 
N4 H15 OFD sing 367 n n 
N4 H16 OFD sing 368 n n 
N5 H17 OFD sing 369 n n 
O4 H18 OFD sing 370 n n 
#
_atom_sites.entry_id                     9MLT 
_atom_sites.fract_transf_matrix[1][1]    0.007462 
_atom_sites.fract_transf_matrix[1][2]    0.004308 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008616 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013235 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 301 301 NAP NAP . 
C 3 OFD A 1 302 302 OFD OFD . 
D 4 HOH A 1 401 117 HOH HOH . 
D 4 HOH A 2 402 41 HOH HOH . 
D 4 HOH A 3 403 128 HOH HOH . 
D 4 HOH A 4 404 2 HOH HOH . 
D 4 HOH A 5 405 24 HOH HOH . 
D 4 HOH A 6 406 27 HOH HOH . 
D 4 HOH A 7 407 79 HOH HOH . 
D 4 HOH A 8 408 11 HOH HOH . 
D 4 HOH A 9 409 53 HOH HOH . 
D 4 HOH A 10 410 162 HOH HOH . 
D 4 HOH A 11 411 61 HOH HOH . 
D 4 HOH A 12 412 22 HOH HOH . 
D 4 HOH A 13 413 4 HOH HOH . 
D 4 HOH A 14 414 21 HOH HOH . 
D 4 HOH A 15 415 29 HOH HOH . 
D 4 HOH A 16 416 65 HOH HOH . 
D 4 HOH A 17 417 100 HOH HOH . 
D 4 HOH A 18 418 8 HOH HOH . 
D 4 HOH A 19 419 26 HOH HOH . 
D 4 HOH A 20 420 54 HOH HOH . 
D 4 HOH A 21 421 51 HOH HOH . 
D 4 HOH A 22 422 10 HOH HOH . 
D 4 HOH A 23 423 14 HOH HOH . 
D 4 HOH A 24 424 131 HOH HOH . 
D 4 HOH A 25 425 143 HOH HOH . 
D 4 HOH A 26 426 114 HOH HOH . 
D 4 HOH A 27 427 17 HOH HOH . 
D 4 HOH A 28 428 127 HOH HOH . 
D 4 HOH A 29 429 64 HOH HOH . 
D 4 HOH A 30 430 37 HOH HOH . 
D 4 HOH A 31 431 68 HOH HOH . 
D 4 HOH A 32 432 218 HOH HOH . 
D 4 HOH A 33 433 28 HOH HOH . 
D 4 HOH A 34 434 220 HOH HOH . 
D 4 HOH A 35 435 102 HOH HOH . 
D 4 HOH A 36 436 75 HOH HOH . 
D 4 HOH A 37 437 16 HOH HOH . 
D 4 HOH A 38 438 25 HOH HOH . 
D 4 HOH A 39 439 50 HOH HOH . 
D 4 HOH A 40 440 145 HOH HOH . 
D 4 HOH A 41 441 43 HOH HOH . 
D 4 HOH A 42 442 78 HOH HOH . 
D 4 HOH A 43 443 67 HOH HOH . 
D 4 HOH A 44 444 225 HOH HOH . 
D 4 HOH A 45 445 71 HOH HOH . 
D 4 HOH A 46 446 19 HOH HOH . 
D 4 HOH A 47 447 20 HOH HOH . 
D 4 HOH A 48 448 190 HOH HOH . 
D 4 HOH A 49 449 3 HOH HOH . 
D 4 HOH A 50 450 83 HOH HOH . 
D 4 HOH A 51 451 47 HOH HOH . 
D 4 HOH A 52 452 35 HOH HOH . 
D 4 HOH A 53 453 74 HOH HOH . 
D 4 HOH A 54 454 55 HOH HOH . 
D 4 HOH A 55 455 6 HOH HOH . 
D 4 HOH A 56 456 5 HOH HOH . 
D 4 HOH A 57 457 38 HOH HOH . 
D 4 HOH A 58 458 7 HOH HOH . 
D 4 HOH A 59 459 251 HOH HOH . 
D 4 HOH A 60 460 23 HOH HOH . 
D 4 HOH A 61 461 144 HOH HOH . 
D 4 HOH A 62 462 15 HOH HOH . 
D 4 HOH A 63 463 160 HOH HOH . 
D 4 HOH A 64 464 316 HOH HOH . 
D 4 HOH A 65 465 174 HOH HOH . 
D 4 HOH A 66 466 30 HOH HOH . 
D 4 HOH A 67 467 126 HOH HOH . 
D 4 HOH A 68 468 330 HOH HOH . 
D 4 HOH A 69 469 193 HOH HOH . 
D 4 HOH A 70 470 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 OFD . . . C 3 -15.636 -59.015 1.389 1 74.67 ? O1 OFD 302 A 1 
HETATM 2 C C1 OFD . . . C 3 -17.269 -57.057 3.871 1 47.74 ? C1 OFD 302 A 1 
HETATM 3 O O2 OFD . . . C 3 -11.635 -56.68 -3.873 1 66.92 ? O2 OFD 302 A 1 
HETATM 4 C C2 OFD . . . C 3 -14.77 -57.278 4.373 1 48.7 ? C2 OFD 302 A 1 
HETATM 5 C C3 OFD . . . C 3 -14.542 -58.051 3.249 1 45.47 ? C3 OFD 302 A 1 
HETATM 6 C C4 OFD . . . C 3 -15.765 -58.357 2.361 1 56.04 ? C4 OFD 302 A 1 
HETATM 7 C C5 OFD . . . C 3 -13.181 -58.366 3.229 1 52.12 ? C5 OFD 302 A 1 
HETATM 8 C C6 OFD . . . C 3 -12.626 -57.766 4.338 1 48.16 ? C6 OFD 302 A 1 
HETATM 9 C C7 OFD . . . C 3 -12.289 -59.172 2.244 1 48.99 ? C7 OFD 302 A 1 
HETATM 10 C C8 OFD . . . C 3 -12.301 -58.496 0.857 1 59.05 ? C8 OFD 302 A 1 
HETATM 11 C C9 OFD . . . C 3 -12.302 -59.265 -0.301 1 62.01 ? C9 OFD 302 A 1 
HETATM 12 C C10 OFD . . . C 3 -12.342 -58.665 -1.559 1 58.96 ? C10 OFD 302 A 1 
HETATM 13 C C11 OFD . . . C 3 -12.374 -57.28 -1.665 1 59.99 ? C11 OFD 302 A 1 
HETATM 14 C C12 OFD . . . C 3 -12.385 -56.51 -0.509 1 54.09 ? C12 OFD 302 A 1 
HETATM 15 O O3 OFD . . . C 3 -13.331 -52.398 -2.302 1 62.79 ? O3 OFD 302 A 1 
HETATM 16 C C13 OFD . . . C 3 -12.347 -57.11 0.742 1 53.14 ? C13 OFD 302 A 1 
HETATM 17 C C14 OFD . . . C 3 -12.463 -56.585 -3.035 1 62.67 ? C14 OFD 302 A 1 
HETATM 18 C C15 OFD . . . C 3 -14.339 -55.046 -4.27 1 75.96 ? C15 OFD 302 A 1 
HETATM 19 C C16 OFD . . . C 3 -13.751 -53.901 -4.772 1 75.36 ? C16 OFD 302 A 1 
HETATM 20 C C17 OFD . . . C 3 -14.389 -53.152 -5.753 1 83.46 ? C17 OFD 302 A 1 
HETATM 21 C C18 OFD . . . C 3 -15.629 -53.523 -6.244 1 74.18 ? C18 OFD 302 A 1 
HETATM 22 C C19 OFD . . . C 3 -16.239 -54.658 -5.746 1 73.73 ? C19 OFD 302 A 1 
HETATM 23 C C20 OFD . . . C 3 -15.595 -55.406 -4.761 1 79.02 ? C20 OFD 302 A 1 
HETATM 24 C C21 OFD . . . C 3 -17.604 -55.067 -6.291 1 70.05 ? C21 OFD 302 A 1 
HETATM 25 C C22 OFD . . . C 3 -12.401 -53.439 -4.262 1 64.88 ? C22 OFD 302 A 1 
HETATM 26 C C23 OFD . . . C 3 -12.725 -52.235 -3.393 1 61.09 ? C23 OFD 302 A 1 
HETATM 27 N N1 OFD . . . C 3 -17.081 -57.864 2.681 1 48.71 ? N1 OFD 302 A 1 
HETATM 28 N N2 OFD . . . C 3 -16.123 -56.761 4.719 1 44.11 ? N2 OFD 302 A 1 
HETATM 29 N N3 OFD . . . C 3 -13.59 -57.111 5.033 1 47.05 ? N3 OFD 302 A 1 
HETATM 30 N N4 OFD . . . C 3 -18.569 -56.529 4.248 1 42.02 ? N4 OFD 302 A 1 
HETATM 31 N N5 OFD . . . C 3 -13.725 -55.849 -3.199 1 74.6 ? N5 OFD 302 A 1 
HETATM 32 N N6 OFD . . . C 3 -18.619 -55.364 -6.703 1 68.44 ? N6 OFD 302 A 1 
HETATM 33 O O4 OFD . . . C 3 -12.396 -51.082 -3.775 1 70.42 -1 O4 OFD 302 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           33 
#