data_9MNW
#
_model_server_result.job_id            N6kEPMJEgnwcijVwR3KaUg 
_model_server_result.datetime_utc      '2025-03-22 02:14:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9mnw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":201}' 
#
_entry.id    9MNW 
#
_exptl.entry_id    9MNW 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              471.462 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5E)-5-({(5P)-5-[6-(4-acetylpiperazin-1-yl)-3-nitropyridin-2-yl]-2-fluorophenyl}methylidene)-1,3-thiazolidine-2,4-dione 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9MNW 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9MNW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 C SG CYS 41 D CYS 22 1_555 C SG CYS 115 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 D SG CYS 43 E CYS 23 1_555 D SG CYS 114 E CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 E SG CYS 44 C CYS 22 1_555 E SG CYS 117 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C21 H18 F N5 O5 S' 
_chem_comp.formula_weight    471.462 
_chem_comp.id                A1BM8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5E)-5-({(5P)-5-[6-(4-acetylpiperazin-1-yl)-3-nitropyridin-2-yl]-2-fluorophenyl}methylidene)-1,3-thiazolidine-2,4-dione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 C02 A1BM8 sing 1 n n 
C02 O03 A1BM8 doub 2 n n 
C02 N04 A1BM8 sing 3 n n 
N04 C05 A1BM8 sing 4 n n 
N04 C09 A1BM8 sing 5 n n 
C05 C06 A1BM8 sing 6 n n 
C06 N07 A1BM8 sing 7 n n 
N07 C08 A1BM8 sing 8 n n 
N07 C10 A1BM8 sing 9 n n 
C08 C09 A1BM8 sing 10 n n 
C10 N11 A1BM8 doub 11 n y 
C10 C15 A1BM8 sing 12 n y 
N11 C12 A1BM8 sing 13 n y 
C12 C13 A1BM8 doub 14 n y 
C12 C19 A1BM8 sing 15 n n 
C13 C14 A1BM8 sing 16 n y 
C13 N16 A1BM8 sing 17 n n 
C14 C15 A1BM8 doub 18 n y 
N16 O17 A1BM8 doub 19 n n 
N16 O18 A1BM8 doub 20 n n 
C19 C20 A1BM8 doub 21 n y 
C19 C24 A1BM8 sing 22 n y 
C20 C21 A1BM8 sing 23 n y 
C21 C22 A1BM8 doub 24 n y 
C21 C26 A1BM8 sing 25 n n 
C22 C23 A1BM8 sing 26 n y 
C22 F25 A1BM8 sing 27 n n 
C23 C24 A1BM8 doub 28 n y 
C26 C27 A1BM8 doub 29 e n 
C27 S33 A1BM8 sing 30 n n 
C28 O29 A1BM8 doub 31 n n 
C28 N30 A1BM8 sing 32 n n 
N30 C31 A1BM8 sing 33 n n 
C31 O32 A1BM8 doub 34 n n 
C31 S33 A1BM8 sing 35 n n 
C01 H1 A1BM8 sing 36 n n 
C01 H2 A1BM8 sing 37 n n 
C01 H3 A1BM8 sing 38 n n 
C05 H4 A1BM8 sing 39 n n 
C05 H5 A1BM8 sing 40 n n 
C06 H6 A1BM8 sing 41 n n 
C06 H7 A1BM8 sing 42 n n 
C08 H8 A1BM8 sing 43 n n 
C08 H9 A1BM8 sing 44 n n 
C09 H10 A1BM8 sing 45 n n 
C09 H11 A1BM8 sing 46 n n 
C14 H12 A1BM8 sing 47 n n 
C15 H13 A1BM8 sing 48 n n 
C20 H14 A1BM8 sing 49 n n 
C23 H15 A1BM8 sing 50 n n 
C24 H16 A1BM8 sing 51 n n 
C26 H17 A1BM8 sing 52 n n 
C28 C27 A1BM8 sing 53 n n 
N30 H18 A1BM8 sing 54 n n 
#
_atom_sites.entry_id                     9MNW 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          G 
_pdbx_nonpoly_scheme.entity_id        7 
_pdbx_nonpoly_scheme.mon_id           A1BM8 
_pdbx_nonpoly_scheme.pdb_strand_id    B 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      201 
_pdbx_nonpoly_scheme.auth_seq_num     201 
_pdbx_nonpoly_scheme.pdb_mon_id       A1BM8 
_pdbx_nonpoly_scheme.auth_mon_id      TZD 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 A1BM8 . . . G 7 123.946 147.402 106.769 1 51.72 ? C01 A1BM8 201 B 1 
HETATM 2 C C02 A1BM8 . . . G 7 124.691 146.078 106.522 1 52 ? C02 A1BM8 201 B 1 
HETATM 3 O O03 A1BM8 . . . G 7 124.093 145.066 106.363 1 56.32 ? O03 A1BM8 201 B 1 
HETATM 4 N N04 A1BM8 . . . G 7 126.15 146.047 106.487 1 43.55 ? N04 A1BM8 201 B 1 
HETATM 5 C C05 A1BM8 . . . G 7 126.874 144.872 106.265 1 43.24 ? C05 A1BM8 201 B 1 
HETATM 6 C C06 A1BM8 . . . G 7 127.839 145.112 105.118 1 46.4 ? C06 A1BM8 201 B 1 
HETATM 7 N N07 A1BM8 . . . G 7 128.942 146.011 105.57 1 34.1 ? N07 A1BM8 201 B 1 
HETATM 8 C C08 A1BM8 . . . G 7 128.458 146.751 106.778 1 46.74 ? C08 A1BM8 201 B 1 
HETATM 9 C C09 A1BM8 . . . G 7 126.988 147.166 106.66 1 46.17 ? C09 A1BM8 201 B 1 
HETATM 10 C C10 A1BM8 . . . G 7 130.275 145.436 105.624 1 33.58 ? C10 A1BM8 201 B 1 
HETATM 11 N N11 A1BM8 . . . G 7 131.084 145.852 106.566 1 45.84 ? N11 A1BM8 201 B 1 
HETATM 12 C C12 A1BM8 . . . G 7 132.311 145.388 106.698 1 48.03 ? C12 A1BM8 201 B 1 
HETATM 13 C C13 A1BM8 . . . G 7 132.795 144.425 105.816 1 47.49 ? C13 A1BM8 201 B 1 
HETATM 14 C C14 A1BM8 . . . G 7 131.962 143.949 104.805 1 47.15 ? C14 A1BM8 201 B 1 
HETATM 15 C C15 A1BM8 . . . G 7 130.668 144.466 104.71 1 40.02 ? C15 A1BM8 201 B 1 
HETATM 16 N N16 A1BM8 . . . G 7 134.137 143.888 105.923 1 51.18 ? N16 A1BM8 201 B 1 
HETATM 17 O O17 A1BM8 . . . G 7 135.045 144.495 105.491 1 55.51 ? O17 A1BM8 201 B 1 
HETATM 18 O O18 A1BM8 . . . G 7 134.333 142.646 106.534 1 50.21 ? O18 A1BM8 201 B 1 
HETATM 19 C C19 A1BM8 . . . G 7 133.12 146.015 107.841 1 40.5 ? C19 A1BM8 201 B 1 
HETATM 20 C C20 A1BM8 . . . G 7 133.551 145.293 108.934 1 36.66 ? C20 A1BM8 201 B 1 
HETATM 21 C C21 A1BM8 . . . G 7 134.241 145.967 109.937 1 40.12 ? C21 A1BM8 201 B 1 
HETATM 22 C C22 A1BM8 . . . G 7 134.509 147.313 109.849 1 46.24 ? C22 A1BM8 201 B 1 
HETATM 23 C C23 A1BM8 . . . G 7 134.064 148.038 108.76 1 47 ? C23 A1BM8 201 B 1 
HETATM 24 C C24 A1BM8 . . . G 7 133.359 147.379 107.764 1 46.74 ? C24 A1BM8 201 B 1 
HETATM 25 C C26 A1BM8 . . . G 7 134.767 145.199 111.141 1 42.75 ? C26 A1BM8 201 B 1 
HETATM 26 C C27 A1BM8 . . . G 7 134.874 143.946 110.759 1 40.71 ? C27 A1BM8 201 B 1 
HETATM 27 C C28 A1BM8 . . . G 7 135.14 142.226 110.632 1 35.86 ? C28 A1BM8 201 B 1 
HETATM 28 O O29 A1BM8 . . . G 7 134.924 141.637 109.64 1 42.39 ? O29 A1BM8 201 B 1 
HETATM 29 N N30 A1BM8 . . . G 7 135.691 141.556 111.851 1 34.12 ? N30 A1BM8 201 B 1 
HETATM 30 C C31 A1BM8 . . . G 7 135.884 142.267 112.818 1 45.6 ? C31 A1BM8 201 B 1 
HETATM 31 O O32 A1BM8 . . . G 7 136.297 141.885 113.852 1 49.27 ? O32 A1BM8 201 B 1 
HETATM 32 S S33 A1BM8 . . . G 7 135.485 143.759 112.513 1 48.63 ? S33 A1BM8 201 B 1 
HETATM 33 F F25 A1BM8 . . . G 7 135.207 147.929 110.848 1 56.16 ? F25 A1BM8 201 B 1 
#
_model_server_stats.io_time_ms              253 
_model_server_stats.parse_time_ms           553 
_model_server_stats.create_model_time_ms    339 
_model_server_stats.query_time_ms           1472 
_model_server_stats.encode_time_ms          36 
_model_server_stats.element_count           33 
#