data_9MPA
#
_model_server_result.job_id            M4PvdpZ5Edkvwe70u4_DrA 
_model_server_result.datetime_utc      '2025-06-27 04:27:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9mpa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":206}' 
#
_entry.id    9MPA 
#
_exptl.entry_id    9MPA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9MPA 
_cell.length_a            77.821 
_cell.length_b            77.821 
_cell.length_c            37.745 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9MPA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 24 1_555 A SG CYS 145 A CYS 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 A SG CYS 48 A CYS 48 1_555 A SG CYS 133 A CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf3 A SG CYS 82 A CYS 82 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf4 A SG CYS 94 A CYS 94 1_555 A SG CYS 112 A CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
metalc ? metalc1 A O SER 78 A SER 78 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc2 A O CYS 82 A CYS 82 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc3 A OG SER 90 A SER 90 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? 
metalc ? metalc4 A O ARG 91 A ARG 91 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc5 G NA NA . A NA 206 1_555 H O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? 
metalc ? metalc6 G NA NA . A NA 206 1_555 H O HOH . A HOH 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     9MPA 
_atom_sites.fract_transf_matrix[1][1]    0.01285 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01285 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026494 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDG A 1 201 201 NDG NDG . 
C 3 CL A 1 202 202 CL CL . 
D 3 CL A 1 203 203 CL CL . 
E 3 CL A 1 204 204 CL CL . 
F 3 CL A 1 205 205 CL CL . 
G 4 NA A 1 206 206 NA NA . 
H 5 HOH A 1 301 38 HOH HOH . 
H 5 HOH A 2 302 57 HOH HOH . 
H 5 HOH A 3 303 72 HOH HOH . 
H 5 HOH A 4 304 26 HOH HOH . 
H 5 HOH A 5 305 60 HOH HOH . 
H 5 HOH A 6 306 65 HOH HOH . 
H 5 HOH A 7 307 22 HOH HOH . 
H 5 HOH A 8 308 33 HOH HOH . 
H 5 HOH A 9 309 53 HOH HOH . 
H 5 HOH A 10 310 18 HOH HOH . 
H 5 HOH A 11 311 11 HOH HOH . 
H 5 HOH A 12 312 23 HOH HOH . 
H 5 HOH A 13 313 41 HOH HOH . 
H 5 HOH A 14 314 29 HOH HOH . 
H 5 HOH A 15 315 14 HOH HOH . 
H 5 HOH A 16 316 2 HOH HOH . 
H 5 HOH A 17 317 21 HOH HOH . 
H 5 HOH A 18 318 17 HOH HOH . 
H 5 HOH A 19 319 36 HOH HOH . 
H 5 HOH A 20 320 66 HOH HOH . 
H 5 HOH A 21 321 50 HOH HOH . 
H 5 HOH A 22 322 47 HOH HOH . 
H 5 HOH A 23 323 31 HOH HOH . 
H 5 HOH A 24 324 54 HOH HOH . 
H 5 HOH A 25 325 34 HOH HOH . 
H 5 HOH A 26 326 58 HOH HOH . 
H 5 HOH A 27 327 44 HOH HOH . 
H 5 HOH A 28 328 55 HOH HOH . 
H 5 HOH A 29 329 7 HOH HOH . 
H 5 HOH A 30 330 27 HOH HOH . 
H 5 HOH A 31 331 6 HOH HOH . 
H 5 HOH A 32 332 3 HOH HOH . 
H 5 HOH A 33 333 20 HOH HOH . 
H 5 HOH A 34 334 28 HOH HOH . 
H 5 HOH A 35 335 64 HOH HOH . 
H 5 HOH A 36 336 39 HOH HOH . 
H 5 HOH A 37 337 24 HOH HOH . 
H 5 HOH A 38 338 37 HOH HOH . 
H 5 HOH A 39 339 9 HOH HOH . 
H 5 HOH A 40 340 67 HOH HOH . 
H 5 HOH A 41 341 40 HOH HOH . 
H 5 HOH A 42 342 79 HOH HOH . 
H 5 HOH A 43 343 63 HOH HOH . 
H 5 HOH A 44 344 42 HOH HOH . 
H 5 HOH A 45 345 71 HOH HOH . 
H 5 HOH A 46 346 52 HOH HOH . 
H 5 HOH A 47 347 16 HOH HOH . 
H 5 HOH A 48 348 12 HOH HOH . 
H 5 HOH A 49 349 1 HOH HOH . 
H 5 HOH A 50 350 46 HOH HOH . 
H 5 HOH A 51 351 32 HOH HOH . 
H 5 HOH A 52 352 5 HOH HOH . 
H 5 HOH A 53 353 35 HOH HOH . 
H 5 HOH A 54 354 13 HOH HOH . 
H 5 HOH A 55 355 4 HOH HOH . 
H 5 HOH A 56 356 77 HOH HOH . 
H 5 HOH A 57 357 51 HOH HOH . 
H 5 HOH A 58 358 62 HOH HOH . 
H 5 HOH A 59 359 10 HOH HOH . 
H 5 HOH A 60 360 49 HOH HOH . 
H 5 HOH A 61 361 56 HOH HOH . 
H 5 HOH A 62 362 87 HOH HOH . 
H 5 HOH A 63 363 8 HOH HOH . 
H 5 HOH A 64 364 25 HOH HOH . 
H 5 HOH A 65 365 15 HOH HOH . 
H 5 HOH A 66 366 73 HOH HOH . 
H 5 HOH A 67 367 91 HOH HOH . 
H 5 HOH A 68 368 59 HOH HOH . 
H 5 HOH A 69 369 30 HOH HOH . 
H 5 HOH A 70 370 68 HOH HOH . 
H 5 HOH A 71 371 19 HOH HOH . 
H 5 HOH A 72 372 88 HOH HOH . 
H 5 HOH A 73 373 69 HOH HOH . 
H 5 HOH A 74 374 43 HOH HOH . 
H 5 HOH A 75 375 76 HOH HOH . 
H 5 HOH A 76 376 80 HOH HOH . 
H 5 HOH A 77 377 81 HOH HOH . 
H 5 HOH A 78 378 89 HOH HOH . 
H 5 HOH A 79 379 61 HOH HOH . 
H 5 HOH A 80 380 82 HOH HOH . 
H 5 HOH A 81 381 75 HOH HOH . 
H 5 HOH A 82 382 45 HOH HOH . 
H 5 HOH A 83 383 86 HOH HOH . 
H 5 HOH A 84 384 74 HOH HOH . 
H 5 HOH A 85 385 85 HOH HOH . 
H 5 HOH A 86 386 90 HOH HOH . 
H 5 HOH A 87 387 83 HOH HOH . 
H 5 HOH A 88 388 78 HOH HOH . 
H 5 HOH A 89 389 48 HOH HOH . 
H 5 HOH A 90 390 84 HOH HOH . 
H 5 HOH A 91 391 70 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -7.651 
_atom_site.Cartn_y               -14.26 
_atom_site.Cartn_z               12.627 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        20.64 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           206 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           1 
#