data_9MQK # _model_server_result.job_id tdGBoEmMP_ZE0fH22jtOjw _model_server_result.datetime_utc '2025-02-26 22:25:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9mqk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 9MQK # _exptl.entry_id 9MQK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 395.495 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl (1S,3R,4S,6S,8M)-2-[(1-ethyl-1H-pyrazol-4-yl)methyl]-8-(3-hydroxyphenyl)-3,4-dimethyl-2-azabicyclo[2.2.2]oct-7-ene-6-carboxylate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9MQK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9MQK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 139 A CYS 131 1_555 A SG CYS 218 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 C SG CYS 22 E CYS 24 1_555 C SG CYS 95 E CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 D SG CYS 25 H CYS 22 1_555 D SG CYS 99 H CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 E SG CYS 24 L CYS 23 1_555 E SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C23 H29 N3 O3' _chem_comp.formula_weight 395.495 _chem_comp.id A1BNM _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl (1S,3R,4S,6S,8M)-2-[(1-ethyl-1H-pyrazol-4-yl)methyl]-8-(3-hydroxyphenyl)-3,4-dimethyl-2-azabicyclo[2.2.2]oct-7-ene-6-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 O11 A1BNM sing 1 n n O11 C10 A1BNM sing 2 n n O13 C10 A1BNM doub 3 n n C10 C09 A1BNM sing 4 n n C17 C16 A1BNM doub 5 n y C17 C18 A1BNM sing 6 n y C16 C15 A1BNM sing 7 n y C09 C08 A1BNM sing 8 n n C09 C04 A1BNM sing 9 n n C08 C07 A1BNM sing 10 n n C05 C04 A1BNM sing 11 n n C05 C06 A1BNM doub 12 n n C04 N03 A1BNM sing 13 n n C06 C15 A1BNM sing 14 n n C06 C07 A1BNM sing 15 n n C18 C19 A1BNM doub 16 n y C15 C21 A1BNM doub 17 n y C07 C14 A1BNM sing 18 n n C07 C02 A1BNM sing 19 n n C28 N25 A1BNM sing 20 n n C28 C29 A1BNM sing 21 n n N03 C02 A1BNM sing 22 n n N03 C22 A1BNM sing 23 n n C24 N25 A1BNM sing 24 n y C24 C23 A1BNM doub 25 n y C21 C19 A1BNM sing 26 n y C19 O20 A1BNM sing 27 n n N25 N26 A1BNM sing 28 n y C02 C01 A1BNM sing 29 n n C23 C22 A1BNM sing 30 n n C23 C27 A1BNM sing 31 n y N26 C27 A1BNM doub 32 n y C01 H1 A1BNM sing 33 n n C01 H2 A1BNM sing 34 n n C01 H3 A1BNM sing 35 n n C02 H4 A1BNM sing 36 n n C04 H5 A1BNM sing 37 n n C05 H6 A1BNM sing 38 n n C08 H7 A1BNM sing 39 n n C08 H8 A1BNM sing 40 n n C09 H9 A1BNM sing 41 n n C12 H10 A1BNM sing 42 n n C12 H11 A1BNM sing 43 n n C12 H12 A1BNM sing 44 n n C14 H13 A1BNM sing 45 n n C14 H14 A1BNM sing 46 n n C14 H15 A1BNM sing 47 n n C16 H16 A1BNM sing 48 n n C17 H17 A1BNM sing 49 n n C18 H18 A1BNM sing 50 n n C21 H19 A1BNM sing 51 n n C22 H20 A1BNM sing 52 n n C22 H21 A1BNM sing 53 n n C24 H22 A1BNM sing 54 n n C27 H23 A1BNM sing 55 n n C28 H24 A1BNM sing 56 n n C28 H25 A1BNM sing 57 n n C29 H26 A1BNM sing 58 n n C29 H27 A1BNM sing 59 n n C29 H28 A1BNM sing 60 n n O20 H30 A1BNM sing 61 n n # _atom_sites.entry_id 9MQK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 A1BNM A 1 401 1 A1BNM A1 . G 5 A1BNM B 1 401 1 A1BNM A1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 A1BNM . . . F 5 159.842 138.966 180.963 1 67.16 ? C01 A1BNM 401 A 1 HETATM 2 C C02 A1BNM . . . F 5 159.845 139.688 179.604 1 74.04 ? C02 A1BNM 401 A 1 HETATM 3 C C04 A1BNM . . . F 5 161.863 140.245 178.124 1 69.77 ? C04 A1BNM 401 A 1 HETATM 4 C C05 A1BNM . . . F 5 162.008 138.741 177.963 1 62.69 ? C05 A1BNM 401 A 1 HETATM 5 C C06 A1BNM . . . F 5 161.014 137.911 177.983 1 63.8 ? C06 A1BNM 401 A 1 HETATM 6 C C07 A1BNM . . . F 5 159.73 138.65 178.386 1 63.33 ? C07 A1BNM 401 A 1 HETATM 7 C C08 A1BNM . . . F 5 159.617 139.587 177.122 1 54.74 ? C08 A1BNM 401 A 1 HETATM 8 C C09 A1BNM . . . F 5 160.832 140.629 177.024 1 63 ? C09 A1BNM 401 A 1 HETATM 9 C C10 A1BNM . . . F 5 161.505 140.63 175.602 1 62.14 ? C10 A1BNM 401 A 1 HETATM 10 C C12 A1BNM . . . F 5 161.755 141.642 173.49 1 54.89 ? C12 A1BNM 401 A 1 HETATM 11 C C14 A1BNM . . . F 5 158.581 137.624 178.537 1 63.77 ? C14 A1BNM 401 A 1 HETATM 12 C C15 A1BNM . . . F 5 160.964 136.555 177.227 1 66.22 ? C15 A1BNM 401 A 1 HETATM 13 C C16 A1BNM . . . F 5 160.965 136.597 175.813 1 57.28 ? C16 A1BNM 401 A 1 HETATM 14 C C17 A1BNM . . . F 5 160.926 135.422 175.052 1 54.37 ? C17 A1BNM 401 A 1 HETATM 15 C C18 A1BNM . . . F 5 160.89 134.173 175.662 1 63.58 ? C18 A1BNM 401 A 1 HETATM 16 C C19 A1BNM . . . F 5 160.89 134.065 177.07 1 70.53 ? C19 A1BNM 401 A 1 HETATM 17 C C21 A1BNM . . . F 5 160.932 135.279 177.826 1 71.79 ? C21 A1BNM 401 A 1 HETATM 18 C C22 A1BNM . . . F 5 162.069 140.611 180.69 1 71.54 ? C22 A1BNM 401 A 1 HETATM 19 C C23 A1BNM . . . F 5 163.155 141.625 180.696 1 73.85 ? C23 A1BNM 401 A 1 HETATM 20 C C24 A1BNM . . . F 5 163.261 142.825 179.948 1 74.38 ? C24 A1BNM 401 A 1 HETATM 21 C C27 A1BNM . . . F 5 164.361 141.631 181.45 1 81.05 ? C27 A1BNM 401 A 1 HETATM 22 C C28 A1BNM . . . F 5 164.958 144.804 179.679 1 79.73 ? C28 A1BNM 401 A 1 HETATM 23 C C29 A1BNM . . . F 5 165.631 145.698 180.719 1 80 ? C29 A1BNM 401 A 1 HETATM 24 N N03 A1BNM . . . F 5 161.131 140.642 179.442 1 75.84 ? N03 A1BNM 401 A 1 HETATM 25 N N25 A1BNM . . . F 5 164.449 143.464 180.266 1 85.78 ? N25 A1BNM 401 A 1 HETATM 26 N N26 A1BNM . . . F 5 165.12 142.709 181.2 1 82.42 ? N26 A1BNM 401 A 1 HETATM 27 O O11 A1BNM . . . F 5 160.883 141.274 174.572 1 56.95 ? O11 A1BNM 401 A 1 HETATM 28 O O13 A1BNM . . . F 5 162.543 140.102 175.433 1 65.94 ? O13 A1BNM 401 A 1 HETATM 29 O O20 A1BNM . . . F 5 160.855 132.88 177.72 1 78.86 ? O20 A1BNM 401 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 1349 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 29 #