data_9MSX # _model_server_result.job_id IieZIkSBJagPATKZBzoHkQ _model_server_result.datetime_utc '2025-06-18 16:54:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9msx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 9MSX # _exptl.entry_id 9MSX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9MSX _cell.length_a 47.907 _cell.length_b 47.907 _cell.length_c 342.687 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9MSX _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall 'P 61' _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G 1 1 B,D,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 134 n n C1 C2 EDO sing 135 n n C1 H11 EDO sing 136 n n C1 H12 EDO sing 137 n n O1 HO1 EDO sing 138 n n C2 O2 EDO sing 139 n n C2 H21 EDO sing 140 n n C2 H22 EDO sing 141 n n O2 HO2 EDO sing 142 n n # _atom_sites.entry_id 9MSX _atom_sites.fract_transf_matrix[1][1] 0.020874 _atom_sites.fract_transf_matrix[1][2] 0.012051 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1BPC A 1 301 301 A1BPC T9U . D 3 EDO B 1 301 302 EDO EDO . E 2 A1BPC B 1 302 301 A1BPC T9U . F 3 EDO B 1 303 302 EDO EDO . G 4 HOH A 1 401 35 HOH HOH . G 4 HOH A 2 402 17 HOH HOH . G 4 HOH A 3 403 1 HOH HOH . G 4 HOH A 4 404 515 HOH HOH . G 4 HOH A 5 405 10 HOH HOH . G 4 HOH A 6 406 28 HOH HOH . G 4 HOH A 7 407 429 HOH HOH . G 4 HOH A 8 408 43 HOH HOH . G 4 HOH A 9 409 209 HOH HOH . G 4 HOH A 10 410 52 HOH HOH . G 4 HOH A 11 411 125 HOH HOH . G 4 HOH A 12 412 58 HOH HOH . G 4 HOH A 13 413 311 HOH HOH . G 4 HOH A 14 414 595 HOH HOH . G 4 HOH A 15 415 198 HOH HOH . G 4 HOH A 16 416 20 HOH HOH . G 4 HOH A 17 417 385 HOH HOH . G 4 HOH A 18 418 503 HOH HOH . G 4 HOH A 19 419 41 HOH HOH . G 4 HOH A 20 420 529 HOH HOH . G 4 HOH A 21 421 449 HOH HOH . G 4 HOH A 22 422 16 HOH HOH . G 4 HOH A 23 423 399 HOH HOH . G 4 HOH A 24 424 112 HOH HOH . G 4 HOH A 25 425 405 HOH HOH . G 4 HOH A 26 426 7 HOH HOH . G 4 HOH A 27 427 9 HOH HOH . G 4 HOH A 28 428 608 HOH HOH . G 4 HOH A 29 429 200 HOH HOH . G 4 HOH A 30 430 653 HOH HOH . G 4 HOH A 31 431 254 HOH HOH . G 4 HOH A 32 432 21 HOH HOH . G 4 HOH A 33 433 207 HOH HOH . G 4 HOH A 34 434 360 HOH HOH . G 4 HOH A 35 435 409 HOH HOH . G 4 HOH A 36 436 437 HOH HOH . G 4 HOH A 37 437 389 HOH HOH . G 4 HOH A 38 438 568 HOH HOH . G 4 HOH A 39 439 714 HOH HOH . G 4 HOH A 40 440 476 HOH HOH . G 4 HOH A 41 441 413 HOH HOH . H 4 HOH B 1 401 292 HOH HOH . H 4 HOH B 2 402 465 HOH HOH . H 4 HOH B 3 403 86 HOH HOH . H 4 HOH B 4 404 202 HOH HOH . H 4 HOH B 5 405 31 HOH HOH . H 4 HOH B 6 406 37 HOH HOH . H 4 HOH B 7 407 115 HOH HOH . H 4 HOH B 8 408 682 HOH HOH . H 4 HOH B 9 409 2 HOH HOH . H 4 HOH B 10 410 38 HOH HOH . H 4 HOH B 11 411 577 HOH HOH . H 4 HOH B 12 412 565 HOH HOH . H 4 HOH B 13 413 11 HOH HOH . H 4 HOH B 14 414 264 HOH HOH . H 4 HOH B 15 415 267 HOH HOH . H 4 HOH B 16 416 80 HOH HOH . H 4 HOH B 17 417 12 HOH HOH . H 4 HOH B 18 418 194 HOH HOH . H 4 HOH B 19 419 25 HOH HOH . H 4 HOH B 20 420 353 HOH HOH . H 4 HOH B 21 421 506 HOH HOH . H 4 HOH B 22 422 446 HOH HOH . H 4 HOH B 23 423 355 HOH HOH . H 4 HOH B 24 424 586 HOH HOH . H 4 HOH B 25 425 219 HOH HOH . H 4 HOH B 26 426 350 HOH HOH . H 4 HOH B 27 427 417 HOH HOH . H 4 HOH B 28 428 40 HOH HOH . H 4 HOH B 29 429 349 HOH HOH . H 4 HOH B 30 430 719 HOH HOH . H 4 HOH B 31 431 375 HOH HOH . H 4 HOH B 32 432 572 HOH HOH . H 4 HOH B 33 433 66 HOH HOH . H 4 HOH B 34 434 220 HOH HOH . H 4 HOH B 35 435 15 HOH HOH . H 4 HOH B 36 436 649 HOH HOH . H 4 HOH B 37 437 347 HOH HOH . H 4 HOH B 38 438 374 HOH HOH . H 4 HOH B 39 439 296 HOH HOH . H 4 HOH B 40 440 213 HOH HOH . H 4 HOH B 41 441 377 HOH HOH . H 4 HOH B 42 442 380 HOH HOH . H 4 HOH B 43 443 197 HOH HOH . H 4 HOH B 44 444 56 HOH HOH . H 4 HOH B 45 445 571 HOH HOH . H 4 HOH B 46 446 652 HOH HOH . H 4 HOH B 47 447 387 HOH HOH . H 4 HOH B 48 448 359 HOH HOH . H 4 HOH B 49 449 390 HOH HOH . H 4 HOH B 50 450 403 HOH HOH . H 4 HOH B 51 451 752 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 7.112 -0.352 27.874 1 54.24 ? C1 EDO 301 B 1 HETATM 2 O O1 EDO . . . D 3 7.2 0.953 28.415 1 55.24 ? O1 EDO 301 B 1 HETATM 3 C C2 EDO . . . D 3 7.033 -1.449 28.932 1 67.05 ? C2 EDO 301 B 1 HETATM 4 O O2 EDO . . . D 3 5.726 -1.992 29.007 1 54.65 ? O2 EDO 301 B 1 HETATM 5 H H11 EDO . . . D 3 7.882 -0.539 27.313 1 65.09 ? H11 EDO 301 B 1 HETATM 6 H H12 EDO . . . D 3 6.329 -0.432 27.308 1 65.09 ? H12 EDO 301 B 1 HETATM 7 H HO1 EDO . . . D 3 7.42 1.485 27.789 1 66.29 ? HO1 EDO 301 B 1 HETATM 8 H H21 EDO . . . D 3 7.314 -1.059 29.774 1 80.46 ? H21 EDO 301 B 1 HETATM 9 H H22 EDO . . . D 3 7.694 -2.121 28.701 1 80.46 ? H22 EDO 301 B 1 HETATM 10 H HO2 EDO . . . D 3 5.177 -1.349 29.092 1 65.57 ? HO2 EDO 301 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 10 #