data_9MTB # _model_server_result.job_id nt7X7KvF2Hz43DPp2CbpFg _model_server_result.datetime_utc '2025-06-18 20:39:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9mtb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 9MTB # _exptl.entry_id 9MTB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9MTB _cell.length_a 74.162 _cell.length_b 74.162 _cell.length_c 107.61 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9MTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall 'P 4cw 2c' _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 13 n n PG O2G ANP sing 14 n n PG O3G ANP sing 15 n n PG N3B ANP sing 16 n n O2G HOG2 ANP sing 17 n n O3G HOG3 ANP sing 18 n n PB O1B ANP doub 19 n n PB O2B ANP sing 20 n n PB N3B ANP sing 21 n n PB O3A ANP sing 22 n n O2B HOB2 ANP sing 23 n n N3B HNB1 ANP sing 24 n n PA O1A ANP doub 25 n n PA O2A ANP sing 26 n n PA O3A ANP sing 27 n n PA O5' ANP sing 28 n n O2A HOA2 ANP sing 29 n n O5' C5' ANP sing 30 n n C5' C4' ANP sing 31 n n C5' "H5'1" ANP sing 32 n n C5' "H5'2" ANP sing 33 n n C4' O4' ANP sing 34 n n C4' C3' ANP sing 35 n n C4' H4' ANP sing 36 n n O4' C1' ANP sing 37 n n C3' O3' ANP sing 38 n n C3' C2' ANP sing 39 n n C3' H3' ANP sing 40 n n O3' HO3' ANP sing 41 n n C2' O2' ANP sing 42 n n C2' C1' ANP sing 43 n n C2' H2' ANP sing 44 n n O2' HO2' ANP sing 45 n n C1' N9 ANP sing 46 n n C1' H1' ANP sing 47 n n N9 C8 ANP sing 48 n y N9 C4 ANP sing 49 n y C8 N7 ANP doub 50 n y C8 H8 ANP sing 51 n n N7 C5 ANP sing 52 n y C5 C6 ANP sing 53 n y C5 C4 ANP doub 54 n y C6 N6 ANP sing 55 n n C6 N1 ANP doub 56 n y N6 HN61 ANP sing 57 n n N6 HN62 ANP sing 58 n n N1 C2 ANP sing 59 n y C2 N3 ANP doub 60 n y C2 H2 ANP sing 61 n n N3 C4 ANP sing 62 n y # _atom_sites.entry_id 9MTB _atom_sites.fract_transf_matrix[1][1] 0.013484 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013484 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ANP A 1 301 301 ANP ANP . C 3 HOH A 1 401 11 HOH HOH . C 3 HOH A 2 402 14 HOH HOH . C 3 HOH A 3 403 6 HOH HOH . C 3 HOH A 4 404 18 HOH HOH . C 3 HOH A 5 405 1 HOH HOH . C 3 HOH A 6 406 7 HOH HOH . C 3 HOH A 7 407 13 HOH HOH . C 3 HOH A 8 408 4 HOH HOH . C 3 HOH A 9 409 9 HOH HOH . C 3 HOH A 10 410 2 HOH HOH . C 3 HOH A 11 411 8 HOH HOH . C 3 HOH A 12 412 10 HOH HOH . C 3 HOH A 13 413 19 HOH HOH . C 3 HOH A 14 414 15 HOH HOH . C 3 HOH A 15 415 3 HOH HOH . C 3 HOH A 16 416 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ANP . . . B 2 12.66 -5.52 -6.663 1 160.07 ? PG ANP 301 A 1 HETATM 2 O O1G ANP . . . B 2 12.617 -4.195 -7.42 1 131.87 ? O1G ANP 301 A 1 HETATM 3 O O2G ANP . . . B 2 11.619 -6.536 -7.15 1 129.97 ? O2G ANP 301 A 1 HETATM 4 O O3G ANP . . . B 2 14.066 -6.101 -6.469 1 103.81 ? O3G ANP 301 A 1 HETATM 5 P PB ANP . . . B 2 10.904 -4.988 -4.038 1 114.56 ? PB ANP 301 A 1 HETATM 6 O O1B ANP . . . B 2 9.953 -4.071 -4.762 1 119.81 ? O1B ANP 301 A 1 HETATM 7 O O2B ANP . . . B 2 10.423 -6.257 -3.4 1 107.27 ? O2B ANP 301 A 1 HETATM 8 N N3B ANP . . . B 2 12.337 -5.223 -4.901 1 128.51 ? N3B ANP 301 A 1 HETATM 9 P PA ANP . . . B 2 12.195 -4.148 -1.339 1 110.28 ? PA ANP 301 A 1 HETATM 10 O O1A ANP . . . B 2 11.603 -3.296 -0.28 1 78.1 ? O1A ANP 301 A 1 HETATM 11 O O2A ANP . . . B 2 12.522 -5.597 -0.986 1 72.4 ? O2A ANP 301 A 1 HETATM 12 O O3A ANP . . . B 2 11.419 -3.941 -2.766 1 130.39 ? O3A ANP 301 A 1 HETATM 13 O O5' ANP . . . B 2 13.55 -3.28 -1.747 1 85.56 ? O5' ANP 301 A 1 HETATM 14 C C5' ANP . . . B 2 13.533 -1.853 -1.723 1 94.83 ? C5' ANP 301 A 1 HETATM 15 C C4' ANP . . . B 2 13.877 -1.169 -3.04 1 93.63 ? C4' ANP 301 A 1 HETATM 16 O O4' ANP . . . B 2 15.28 -0.85 -2.982 1 98.29 ? O4' ANP 301 A 1 HETATM 17 C C3' ANP . . . B 2 13.642 -1.95 -4.315 1 103.55 ? C3' ANP 301 A 1 HETATM 18 O O3' ANP . . . B 2 12.393 -1.736 -4.913 1 107.71 ? O3' ANP 301 A 1 HETATM 19 C C2' ANP . . . B 2 14.818 -1.519 -5.197 1 108.56 ? C2' ANP 301 A 1 HETATM 20 O O2' ANP . . . B 2 14.385 -0.396 -5.949 1 88.5 ? O2' ANP 301 A 1 HETATM 21 C C1' ANP . . . B 2 15.93 -1.217 -4.16 1 103.36 ? C1' ANP 301 A 1 HETATM 22 N N9 ANP . . . B 2 16.809 -2.366 -3.852 1 78.46 ? N9 ANP 301 A 1 HETATM 23 C C8 ANP . . . B 2 16.713 -3.251 -2.805 1 66.37 ? C8 ANP 301 A 1 HETATM 24 N N7 ANP . . . B 2 17.632 -4.166 -2.81 1 63.18 ? N7 ANP 301 A 1 HETATM 25 C C5 ANP . . . B 2 18.414 -3.88 -3.91 1 77.1 ? C5 ANP 301 A 1 HETATM 26 C C6 ANP . . . B 2 19.592 -4.473 -4.472 1 55.64 ? C6 ANP 301 A 1 HETATM 27 N N6 ANP . . . B 2 20.197 -5.574 -3.984 1 46.45 ? N6 ANP 301 A 1 HETATM 28 N N1 ANP . . . B 2 20.108 -3.908 -5.577 1 63.01 ? N1 ANP 301 A 1 HETATM 29 C C2 ANP . . . B 2 19.524 -2.813 -6.128 1 65.22 ? C2 ANP 301 A 1 HETATM 30 N N3 ANP . . . B 2 18.429 -2.182 -5.689 1 86.54 ? N3 ANP 301 A 1 HETATM 31 C C4 ANP . . . B 2 17.908 -2.751 -4.573 1 85.93 ? C4 ANP 301 A 1 HETATM 32 H HNB1 ANP . . . B 2 12.914 -5.687 -4.408 1 154.59 ? HNB1 ANP 301 A 1 HETATM 33 H "H5'1" ANP . . . B 2 14.161 -1.509 -1.069 1 114.18 ? "H5'1" ANP 301 A 1 HETATM 34 H "H5'2" ANP . . . B 2 12.657 -1.521 -1.468 1 114.18 ? "H5'2" ANP 301 A 1 HETATM 35 H H4' ANP . . . B 2 13.349 -0.361 -3.145 1 112.74 ? H4' ANP 301 A 1 HETATM 36 H H3' ANP . . . B 2 13.796 -2.882 -4.097 1 124.64 ? H3' ANP 301 A 1 HETATM 37 H HO3' ANP . . . B 2 12.441 -0.933 -5.186 1 129.63 ? HO3' ANP 301 A 1 HETATM 38 H H2' ANP . . . B 2 15.162 -2.23 -5.76 1 130.66 ? H2' ANP 301 A 1 HETATM 39 H HO2' ANP . . . B 2 14.011 0.159 -5.425 1 106.58 ? HO2' ANP 301 A 1 HETATM 40 H H1' ANP . . . B 2 16.518 -0.523 -4.496 1 124.41 ? H1' ANP 301 A 1 HETATM 41 H H8 ANP . . . B 2 16.041 -3.178 -2.165 1 80.02 ? H8 ANP 301 A 1 HETATM 42 H HN61 ANP . . . B 2 21.073 -5.595 -3.885 1 56.12 ? HN61 ANP 301 A 1 HETATM 43 H HN62 ANP . . . B 2 19.724 -6.296 -3.76 1 56.12 ? HN62 ANP 301 A 1 HETATM 44 H H2 ANP . . . B 2 19.931 -2.469 -6.89 1 78.65 ? H2 ANP 301 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #