data_9N3Q # _model_server_result.job_id DCVByokYMOnPilw0xdNMvw _model_server_result.datetime_utc '2025-07-05 10:29:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9n3q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":702}' # _entry.id 9N3Q # _exptl.entry_id 9N3Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.663 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(6-amino-5-methylpyridin-3-yl)-2-{(2R,5S)-5-methyl-2-[2-(1-methylpiperidin-4-yl)-1,3-benzothiazol-5-yl]piperidin-1-yl}-2-oxoacetamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9N3Q _cell.length_a 97.41 _cell.length_b 136.45 _cell.length_c 178.26 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9N3Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # _chem_comp.formula 'C27 H34 N6 O2 S' _chem_comp.formula_weight 506.663 _chem_comp.id A1BV2 _chem_comp.mon_nstd_flag . _chem_comp.name N-(6-amino-5-methylpyridin-3-yl)-2-{(2R,5S)-5-methyl-2-[2-(1-methylpiperidin-4-yl)-1,3-benzothiazol-5-yl]piperidin-1-yl}-2-oxoacetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 A1BV2 sing 1 n n C2 C3 A1BV2 sing 2 n n C2 C7 A1BV2 sing 3 n n C3 C4 A1BV2 sing 4 n n C4 C5 A1BV2 sing 5 n n C5 N6 A1BV2 sing 6 n n C5 C21 A1BV2 sing 7 n n N6 C7 A1BV2 sing 8 n n N6 C8 A1BV2 sing 9 n n C8 O9 A1BV2 doub 10 n n C8 C10 A1BV2 sing 11 n n C10 O11 A1BV2 doub 12 n n C10 N12 A1BV2 sing 13 n n N12 C13 A1BV2 sing 14 n n C13 C14 A1BV2 doub 15 n y C13 C20 A1BV2 sing 16 n y C14 N15 A1BV2 sing 17 n y N15 C16 A1BV2 doub 18 n y C16 N17 A1BV2 sing 19 n n C16 C18 A1BV2 sing 20 n y C18 C19 A1BV2 sing 21 n n C18 C20 A1BV2 doub 22 n y C21 C22 A1BV2 doub 23 n y C21 C29 A1BV2 sing 24 n y C22 C23 A1BV2 sing 25 n y C23 C24 A1BV2 doub 26 n y C24 S25 A1BV2 sing 27 n y C24 C28 A1BV2 sing 28 n y S25 C26 A1BV2 sing 29 n y C26 N27 A1BV2 doub 30 n y C26 C30 A1BV2 sing 31 n n N27 C28 A1BV2 sing 32 n y C28 C29 A1BV2 doub 33 n y C30 C31 A1BV2 sing 34 n n C30 C36 A1BV2 sing 35 n n C31 C32 A1BV2 sing 36 n n C32 N33 A1BV2 sing 37 n n N33 C34 A1BV2 sing 38 n n N33 C35 A1BV2 sing 39 n n C35 C36 A1BV2 sing 40 n n C4 H44 A1BV2 sing 41 n n C4 H43 A1BV2 sing 42 n n C5 H45 A1BV2 sing 43 n n C7 H46 A1BV2 sing 44 n n C7 H47 A1BV2 sing 45 n n N12 H48 A1BV2 sing 46 n n C20 H55 A1BV2 sing 47 n n C22 H56 A1BV2 sing 48 n n C1 H38 A1BV2 sing 49 n n C1 H37 A1BV2 sing 50 n n C1 H39 A1BV2 sing 51 n n C14 H49 A1BV2 sing 52 n n C19 H53 A1BV2 sing 53 n n C19 H54 A1BV2 sing 54 n n C19 H52 A1BV2 sing 55 n n C2 H40 A1BV2 sing 56 n n C23 H57 A1BV2 sing 57 n n C29 H58 A1BV2 sing 58 n n C3 H42 A1BV2 sing 59 n n C3 H41 A1BV2 sing 60 n n C30 H59 A1BV2 sing 61 n n C31 H60 A1BV2 sing 62 n n C31 H61 A1BV2 sing 63 n n C32 H63 A1BV2 sing 64 n n C32 H62 A1BV2 sing 65 n n C34 H64 A1BV2 sing 66 n n C34 H66 A1BV2 sing 67 n n C34 H65 A1BV2 sing 68 n n C35 H67 A1BV2 sing 69 n n C35 H68 A1BV2 sing 70 n n C36 H69 A1BV2 sing 71 n n C36 H70 A1BV2 sing 72 n n N17 H50 A1BV2 sing 73 n n N17 H51 A1BV2 sing 74 n n # _atom_sites.entry_id 9N3Q _atom_sites.fract_transf_matrix[1][1] 0.010266 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007329 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00561 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MTA A 1 701 1 MTA MTA . F 4 A1BV2 A 1 702 1 A1BV2 LIG . G 3 MTA C 1 701 2 MTA MTA . H 4 A1BV2 C 1 702 2 A1BV2 LIG . I 5 EDO C 1 703 1 EDO EDO . J 6 HOH A 1 801 21 HOH HOH . J 6 HOH A 2 802 44 HOH HOH . J 6 HOH A 3 803 3 HOH HOH . J 6 HOH A 4 804 49 HOH HOH . J 6 HOH A 5 805 54 HOH HOH . J 6 HOH A 6 806 29 HOH HOH . J 6 HOH A 7 807 86 HOH HOH . J 6 HOH A 8 808 31 HOH HOH . J 6 HOH A 9 809 43 HOH HOH . J 6 HOH A 10 810 28 HOH HOH . J 6 HOH A 11 811 64 HOH HOH . J 6 HOH A 12 812 15 HOH HOH . J 6 HOH A 13 813 34 HOH HOH . J 6 HOH A 14 814 16 HOH HOH . J 6 HOH A 15 815 53 HOH HOH . J 6 HOH A 16 816 52 HOH HOH . J 6 HOH A 17 817 63 HOH HOH . J 6 HOH A 18 818 6 HOH HOH . J 6 HOH A 19 819 10 HOH HOH . J 6 HOH A 20 820 55 HOH HOH . J 6 HOH A 21 821 75 HOH HOH . J 6 HOH A 22 822 76 HOH HOH . J 6 HOH A 23 823 42 HOH HOH . J 6 HOH A 24 824 62 HOH HOH . J 6 HOH A 25 825 5 HOH HOH . J 6 HOH A 26 826 40 HOH HOH . J 6 HOH A 27 827 77 HOH HOH . J 6 HOH A 28 828 68 HOH HOH . J 6 HOH A 29 829 30 HOH HOH . J 6 HOH A 30 830 25 HOH HOH . J 6 HOH A 31 831 84 HOH HOH . J 6 HOH A 32 832 69 HOH HOH . J 6 HOH A 33 833 83 HOH HOH . J 6 HOH A 34 834 61 HOH HOH . J 6 HOH A 35 835 79 HOH HOH . J 6 HOH A 36 836 78 HOH HOH . K 6 HOH B 1 401 46 HOH HOH . K 6 HOH B 2 402 50 HOH HOH . L 6 HOH C 1 801 19 HOH HOH . L 6 HOH C 2 802 38 HOH HOH . L 6 HOH C 3 803 14 HOH HOH . L 6 HOH C 4 804 35 HOH HOH . L 6 HOH C 5 805 60 HOH HOH . L 6 HOH C 6 806 59 HOH HOH . L 6 HOH C 7 807 11 HOH HOH . L 6 HOH C 8 808 36 HOH HOH . L 6 HOH C 9 809 56 HOH HOH . L 6 HOH C 10 810 12 HOH HOH . L 6 HOH C 11 811 48 HOH HOH . L 6 HOH C 12 812 74 HOH HOH . L 6 HOH C 13 813 85 HOH HOH . L 6 HOH C 14 814 32 HOH HOH . L 6 HOH C 15 815 47 HOH HOH . L 6 HOH C 16 816 45 HOH HOH . L 6 HOH C 17 817 9 HOH HOH . L 6 HOH C 18 818 18 HOH HOH . L 6 HOH C 19 819 37 HOH HOH . L 6 HOH C 20 820 26 HOH HOH . L 6 HOH C 21 821 1 HOH HOH . L 6 HOH C 22 822 13 HOH HOH . L 6 HOH C 23 823 4 HOH HOH . L 6 HOH C 24 824 51 HOH HOH . L 6 HOH C 25 825 70 HOH HOH . L 6 HOH C 26 826 8 HOH HOH . L 6 HOH C 27 827 17 HOH HOH . L 6 HOH C 28 828 58 HOH HOH . L 6 HOH C 29 829 7 HOH HOH . L 6 HOH C 30 830 24 HOH HOH . L 6 HOH C 31 831 39 HOH HOH . L 6 HOH C 32 832 2 HOH HOH . L 6 HOH C 33 833 80 HOH HOH . L 6 HOH C 34 834 33 HOH HOH . L 6 HOH C 35 835 27 HOH HOH . L 6 HOH C 36 836 22 HOH HOH . L 6 HOH C 37 837 72 HOH HOH . L 6 HOH C 38 838 23 HOH HOH . L 6 HOH C 39 839 66 HOH HOH . L 6 HOH C 40 840 71 HOH HOH . L 6 HOH C 41 841 65 HOH HOH . L 6 HOH C 42 842 73 HOH HOH . M 6 HOH D 1 401 20 HOH HOH . M 6 HOH D 2 402 57 HOH HOH . M 6 HOH D 3 403 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 A1BV2 . . . F 4 25.18 -17.493 53.258 1 15.17 ? C4 A1BV2 702 A 1 HETATM 2 C C5 A1BV2 . . . F 4 23.722 -17.739 53.68 1 18.9 ? C5 A1BV2 702 A 1 HETATM 3 C C7 A1BV2 . . . F 4 24.048 -16.105 55.608 1 20.49 ? C7 A1BV2 702 A 1 HETATM 4 C C8 A1BV2 . . . F 4 22.85 -18.208 55.92 1 21.32 ? C8 A1BV2 702 A 1 HETATM 5 C C10 A1BV2 . . . F 4 22.314 -19.505 55.407 1 23.58 ? C10 A1BV2 702 A 1 HETATM 6 N N12 A1BV2 . . . F 4 22.954 -20.639 55.779 1 25.23 ? N12 A1BV2 702 A 1 HETATM 7 C C13 A1BV2 . . . F 4 22.608 -21.948 55.4 1 24.08 ? C13 A1BV2 702 A 1 HETATM 8 C C20 A1BV2 . . . F 4 23.618 -22.908 55.315 1 22.24 ? C20 A1BV2 702 A 1 HETATM 9 C C21 A1BV2 . . . F 4 22.738 -16.993 52.805 1 23.33 ? C21 A1BV2 702 A 1 HETATM 10 C C22 A1BV2 . . . F 4 21.505 -16.657 53.342 1 19.4 ? C22 A1BV2 702 A 1 HETATM 11 C C24 A1BV2 . . . F 4 20.871 -15.645 51.273 1 20.09 ? C24 A1BV2 702 A 1 HETATM 12 C C26 A1BV2 . . . F 4 21.191 -14.952 48.928 1 23.08 ? C26 A1BV2 702 A 1 HETATM 13 C C28 A1BV2 . . . F 4 22.109 -15.982 50.709 1 20.81 ? C28 A1BV2 702 A 1 HETATM 14 C C1 A1BV2 . . . F 4 26.318 -17.096 56.017 1 27.56 ? C1 A1BV2 702 A 1 HETATM 15 C C14 A1BV2 . . . F 4 21.305 -22.333 55.114 1 24.45 ? C14 A1BV2 702 A 1 HETATM 16 C C16 A1BV2 . . . F 4 21.96 -24.502 54.668 1 26.99 ? C16 A1BV2 702 A 1 HETATM 17 C C18 A1BV2 . . . F 4 23.289 -24.198 54.942 1 26.47 ? C18 A1BV2 702 A 1 HETATM 18 C C19 A1BV2 . . . F 4 24.354 -25.259 54.835 1 28.52 ? C19 A1BV2 702 A 1 HETATM 19 C C2 A1BV2 . . . F 4 25.535 -16.006 55.278 1 22.19 ? C2 A1BV2 702 A 1 HETATM 20 C C23 A1BV2 . . . F 4 20.576 -15.984 52.588 1 19.59 ? C23 A1BV2 702 A 1 HETATM 21 C C29 A1BV2 . . . F 4 23.043 -16.672 51.513 1 24.7 ? C29 A1BV2 702 A 1 HETATM 22 C C3 A1BV2 . . . F 4 25.712 -16.148 53.763 1 18.59 ? C3 A1BV2 702 A 1 HETATM 23 C C30 A1BV2 . . . F 4 21.101 -14.416 47.521 1 29.41 ? C30 A1BV2 702 A 1 HETATM 24 C C31 A1BV2 . . . F 4 20.585 -15.506 46.58 1 31.35 ? C31 A1BV2 702 A 1 HETATM 25 C C32 A1BV2 . . . F 4 20.403 -14.887 45.193 1 32.7 ? C32 A1BV2 702 A 1 HETATM 26 C C34 A1BV2 . . . F 4 21.521 -13.8 43.355 1 36.5 ? C34 A1BV2 702 A 1 HETATM 27 C C35 A1BV2 . . . F 4 22.255 -13.349 45.613 1 31.02 ? C35 A1BV2 702 A 1 HETATM 28 C C36 A1BV2 . . . F 4 22.464 -13.95 47.006 1 29.11 ? C36 A1BV2 702 A 1 HETATM 29 N N15 A1BV2 . . . F 4 21.025 -23.572 54.762 1 22.06 ? N15 A1BV2 702 A 1 HETATM 30 N N17 A1BV2 . . . F 4 21.605 -25.795 54.293 1 27.04 ? N17 A1BV2 702 A 1 HETATM 31 N N27 A1BV2 . . . F 4 22.198 -15.566 49.427 1 20.07 ? N27 A1BV2 702 A 1 HETATM 32 N N33 A1BV2 . . . F 4 21.683 -14.355 44.706 1 32.78 ? N33 A1BV2 702 A 1 HETATM 33 N N6 A1BV2 . . . F 4 23.52 -17.377 55.096 1 17.87 ? N6 A1BV2 702 A 1 HETATM 34 O O11 A1BV2 . . . F 4 21.342 -19.508 54.674 1 21.46 ? O11 A1BV2 702 A 1 HETATM 35 O O9 A1BV2 . . . F 4 22.689 -17.904 57.084 1 19.19 ? O9 A1BV2 702 A 1 HETATM 36 S S25 A1BV2 . . . F 4 19.922 -14.802 50.056 1 27.99 ? S25 A1BV2 702 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 414 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #