data_9NER # _model_server_result.job_id 0rNQRqvUwb67DH1j8Kb94g _model_server_result.datetime_utc '2025-07-12 18:54:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9ner # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 9NER # _exptl.entry_id 9NER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 72.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACRYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9NER _cell.length_a 60.256 _cell.length_b 98.828 _cell.length_c 142.409 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9NER _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id N _struct_conn.ptnr1_label_comp_id PRO _struct_conn.ptnr1_label_seq_id 2 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id PRO _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id CB _struct_conn.ptnr2_label_comp_id AKR _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id AKR _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.29 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H4 O2' _chem_comp.formula_weight 72.063 _chem_comp.id AKR _chem_comp.mon_nstd_flag . _chem_comp.name 'ACRYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA CB AKR doub 7 n n CA C AKR sing 8 n n CA HA1 AKR sing 9 n n CB HB2 AKR sing 10 n n CB HB3 AKR sing 11 n n C O AKR doub 12 n n C OXT AKR sing 13 n n OXT HXT AKR sing 14 n n # _atom_sites.entry_id 9NER _atom_sites.fract_transf_matrix[1][1] 0.016596 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007022 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 A1BXY A 1 201 201 A1BXY ACA . E 3 AKR B 1 201 201 AKR ACR . F 2 A1BXY C 1 201 201 A1BXY ACA . G 4 HOH A 1 301 28 HOH HOH . G 4 HOH A 2 302 98 HOH HOH . G 4 HOH A 3 303 21 HOH HOH . G 4 HOH A 4 304 16 HOH HOH . G 4 HOH A 5 305 1 HOH HOH . G 4 HOH A 6 306 38 HOH HOH . G 4 HOH A 7 307 4 HOH HOH . G 4 HOH A 8 308 85 HOH HOH . G 4 HOH A 9 309 20 HOH HOH . G 4 HOH A 10 310 23 HOH HOH . G 4 HOH A 11 311 80 HOH HOH . G 4 HOH A 12 312 83 HOH HOH . G 4 HOH A 13 313 6 HOH HOH . G 4 HOH A 14 314 14 HOH HOH . G 4 HOH A 15 315 91 HOH HOH . G 4 HOH A 16 316 26 HOH HOH . G 4 HOH A 17 317 46 HOH HOH . G 4 HOH A 18 318 56 HOH HOH . G 4 HOH A 19 319 27 HOH HOH . G 4 HOH A 20 320 19 HOH HOH . G 4 HOH A 21 321 32 HOH HOH . G 4 HOH A 22 322 45 HOH HOH . G 4 HOH A 23 323 67 HOH HOH . G 4 HOH A 24 324 82 HOH HOH . G 4 HOH A 25 325 63 HOH HOH . G 4 HOH A 26 326 8 HOH HOH . G 4 HOH A 27 327 81 HOH HOH . G 4 HOH A 28 328 87 HOH HOH . G 4 HOH A 29 329 59 HOH HOH . G 4 HOH A 30 330 84 HOH HOH . G 4 HOH A 31 331 54 HOH HOH . G 4 HOH A 32 332 48 HOH HOH . G 4 HOH A 33 333 92 HOH HOH . G 4 HOH A 34 334 22 HOH HOH . G 4 HOH A 35 335 89 HOH HOH . H 4 HOH B 1 301 58 HOH HOH . H 4 HOH B 2 302 5 HOH HOH . H 4 HOH B 3 303 41 HOH HOH . H 4 HOH B 4 304 70 HOH HOH . H 4 HOH B 5 305 12 HOH HOH . H 4 HOH B 6 306 55 HOH HOH . H 4 HOH B 7 307 3 HOH HOH . H 4 HOH B 8 308 18 HOH HOH . H 4 HOH B 9 309 13 HOH HOH . H 4 HOH B 10 310 33 HOH HOH . H 4 HOH B 11 311 24 HOH HOH . H 4 HOH B 12 312 2 HOH HOH . H 4 HOH B 13 313 78 HOH HOH . H 4 HOH B 14 314 64 HOH HOH . H 4 HOH B 15 315 72 HOH HOH . H 4 HOH B 16 316 50 HOH HOH . H 4 HOH B 17 317 95 HOH HOH . H 4 HOH B 18 318 15 HOH HOH . H 4 HOH B 19 319 30 HOH HOH . H 4 HOH B 20 320 61 HOH HOH . H 4 HOH B 21 321 53 HOH HOH . H 4 HOH B 22 322 99 HOH HOH . H 4 HOH B 23 323 69 HOH HOH . H 4 HOH B 24 324 47 HOH HOH . H 4 HOH B 25 325 76 HOH HOH . H 4 HOH B 26 326 79 HOH HOH . H 4 HOH B 27 327 68 HOH HOH . H 4 HOH B 28 328 57 HOH HOH . H 4 HOH B 29 329 62 HOH HOH . I 4 HOH C 1 301 60 HOH HOH . I 4 HOH C 2 302 34 HOH HOH . I 4 HOH C 3 303 39 HOH HOH . I 4 HOH C 4 304 31 HOH HOH . I 4 HOH C 5 305 52 HOH HOH . I 4 HOH C 6 306 9 HOH HOH . I 4 HOH C 7 307 75 HOH HOH . I 4 HOH C 8 308 93 HOH HOH . I 4 HOH C 9 309 43 HOH HOH . I 4 HOH C 10 310 17 HOH HOH . I 4 HOH C 11 311 73 HOH HOH . I 4 HOH C 12 312 29 HOH HOH . I 4 HOH C 13 313 42 HOH HOH . I 4 HOH C 14 314 35 HOH HOH . I 4 HOH C 15 315 7 HOH HOH . I 4 HOH C 16 316 37 HOH HOH . I 4 HOH C 17 317 10 HOH HOH . I 4 HOH C 18 318 74 HOH HOH . I 4 HOH C 19 319 65 HOH HOH . I 4 HOH C 20 320 40 HOH HOH . I 4 HOH C 21 321 44 HOH HOH . I 4 HOH C 22 322 25 HOH HOH . I 4 HOH C 23 323 88 HOH HOH . I 4 HOH C 24 324 11 HOH HOH . I 4 HOH C 25 325 77 HOH HOH . I 4 HOH C 26 326 66 HOH HOH . I 4 HOH C 27 327 71 HOH HOH . I 4 HOH C 28 328 90 HOH HOH . I 4 HOH C 29 329 51 HOH HOH . I 4 HOH C 30 330 49 HOH HOH . I 4 HOH C 31 331 86 HOH HOH . I 4 HOH C 32 332 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA AKR . . . E 3 8.839 34.513 -25.009 1 38.16 ? CA AKR 201 B 1 HETATM 2 C CB AKR . . . E 3 9.515 35.089 -23.927 1 39.87 ? CB AKR 201 B 1 HETATM 3 C C AKR . . . E 3 9.672 33.97 -26.258 1 40.15 ? C AKR 201 B 1 HETATM 4 O O AKR . . . E 3 10.798 34.402 -26.597 1 46.87 ? O AKR 201 B 1 HETATM 5 O OXT AKR . . . E 3 9.271 33.074 -27.027 1 35.56 ? OXT AKR 201 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #