data_9NT0
#
_model_server_result.job_id            wk--snpkWd0x9dyZKse_Lg 
_model_server_result.datetime_utc      '2025-08-24 03:31:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9nt0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    9NT0 
#
_exptl.entry_id    9NT0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              385.478 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9NT0 
_cell.length_a            82.991 
_cell.length_b            82.991 
_cell.length_c            85.128 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9NT0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 79 A SER 79 1_555 B C1 MER . A MER 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.431 ? 
covale ? covale2 A C PHE 81 A PHE 81 1_555 A N KCX 82 A KCX 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 A C KCX 82 A KCX 82 1_555 A N MET 83 A MET 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
#
_chem_comp.formula           'C17 H27 N3 O5 S' 
_chem_comp.formula_weight    385.478 
_chem_comp.id                MER 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Meropenem, bound form' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O6 MER doub 244 n n 
C1 C3 MER sing 245 n n 
C1 H1 MER sing 246 n n 
C5 C2 MER doub 247 n n 
C2 C18 MER sing 248 n n 
C2 S14 MER sing 249 n n 
C4 C3 MER sing 250 n n 
C3 C7 MER sing 251 n n 
C3 H3 MER sing 252 n n 
N10 C4 MER sing 253 n n 
C4 C18 MER sing 254 n n 
C4 H4 MER sing 255 n n 
C11 C5 MER sing 256 n n 
N10 C5 MER sing 257 n n 
O8 C7 MER sing 258 n n 
C7 C9 MER sing 259 n n 
C7 H7 MER sing 260 n n 
O8 HO8 MER sing 261 n n 
C9 H9 MER sing 262 n n 
C9 H9A MER sing 263 n n 
C9 H9B MER sing 264 n n 
N10 HN10 MER sing 265 n n 
O13 C11 MER doub 266 n n 
C11 O12 MER sing 267 n n 
O12 HO12 MER sing 268 n n 
S14 C15 MER sing 269 n n 
C16 C15 MER sing 270 n n 
C15 C21 MER sing 271 n n 
C15 H15 MER sing 272 n n 
C16 C17 MER sing 273 n n 
C16 H16 MER sing 274 n n 
C16 H16A MER sing 275 n n 
C22 C17 MER sing 276 n n 
C17 N19 MER sing 277 n n 
C17 H17 MER sing 278 n n 
C18 C20 MER sing 279 n n 
C18 H18 MER sing 280 n n 
N19 C21 MER sing 281 n n 
N19 HN19 MER sing 282 n n 
C20 H20 MER sing 283 n n 
C20 H20A MER sing 284 n n 
C20 H20B MER sing 285 n n 
C21 H21 MER sing 286 n n 
C21 H21A MER sing 287 n n 
N23 C22 MER sing 288 n n 
O24 C22 MER doub 289 n n 
C25 N23 MER sing 290 n n 
N23 C26 MER sing 291 n n 
C25 H25 MER sing 292 n n 
C25 H25A MER sing 293 n n 
C25 H25B MER sing 294 n n 
C26 H26 MER sing 295 n n 
C26 H26A MER sing 296 n n 
C26 H26B MER sing 297 n n 
#
_atom_sites.entry_id                     9NT0 
_atom_sites.fract_transf_matrix[1][1]    0.012049 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012049 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011747 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MER A 1 301 301 MER MER . 
C 3 SO4 A 1 302 1 SO4 SO4 . 
D 4 HOH A 1 401 2 HOH HOH . 
D 4 HOH A 2 402 110 HOH HOH . 
D 4 HOH A 3 403 3 HOH HOH . 
D 4 HOH A 4 404 136 HOH HOH . 
D 4 HOH A 5 405 56 HOH HOH . 
D 4 HOH A 6 406 71 HOH HOH . 
D 4 HOH A 7 407 24 HOH HOH . 
D 4 HOH A 8 408 67 HOH HOH . 
D 4 HOH A 9 409 45 HOH HOH . 
D 4 HOH A 10 410 97 HOH HOH . 
D 4 HOH A 11 411 102 HOH HOH . 
D 4 HOH A 12 412 74 HOH HOH . 
D 4 HOH A 13 413 70 HOH HOH . 
D 4 HOH A 14 414 57 HOH HOH . 
D 4 HOH A 15 415 89 HOH HOH . 
D 4 HOH A 16 416 49 HOH HOH . 
D 4 HOH A 17 417 61 HOH HOH . 
D 4 HOH A 18 418 53 HOH HOH . 
D 4 HOH A 19 419 98 HOH HOH . 
D 4 HOH A 20 420 80 HOH HOH . 
D 4 HOH A 21 421 54 HOH HOH . 
D 4 HOH A 22 422 29 HOH HOH . 
D 4 HOH A 23 423 65 HOH HOH . 
D 4 HOH A 24 424 63 HOH HOH . 
D 4 HOH A 25 425 58 HOH HOH . 
D 4 HOH A 26 426 39 HOH HOH . 
D 4 HOH A 27 427 7 HOH HOH . 
D 4 HOH A 28 428 92 HOH HOH . 
D 4 HOH A 29 429 72 HOH HOH . 
D 4 HOH A 30 430 12 HOH HOH . 
D 4 HOH A 31 431 16 HOH HOH . 
D 4 HOH A 32 432 36 HOH HOH . 
D 4 HOH A 33 433 13 HOH HOH . 
D 4 HOH A 34 434 50 HOH HOH . 
D 4 HOH A 35 435 10 HOH HOH . 
D 4 HOH A 36 436 34 HOH HOH . 
D 4 HOH A 37 437 82 HOH HOH . 
D 4 HOH A 38 438 73 HOH HOH . 
D 4 HOH A 39 439 95 HOH HOH . 
D 4 HOH A 40 440 30 HOH HOH . 
D 4 HOH A 41 441 128 HOH HOH . 
D 4 HOH A 42 442 6 HOH HOH . 
D 4 HOH A 43 443 32 HOH HOH . 
D 4 HOH A 44 444 27 HOH HOH . 
D 4 HOH A 45 445 52 HOH HOH . 
D 4 HOH A 46 446 42 HOH HOH . 
D 4 HOH A 47 447 38 HOH HOH . 
D 4 HOH A 48 448 76 HOH HOH . 
D 4 HOH A 49 449 18 HOH HOH . 
D 4 HOH A 50 450 23 HOH HOH . 
D 4 HOH A 51 451 33 HOH HOH . 
D 4 HOH A 52 452 8 HOH HOH . 
D 4 HOH A 53 453 1 HOH HOH . 
D 4 HOH A 54 454 15 HOH HOH . 
D 4 HOH A 55 455 77 HOH HOH . 
D 4 HOH A 56 456 21 HOH HOH . 
D 4 HOH A 57 457 135 HOH HOH . 
D 4 HOH A 58 458 68 HOH HOH . 
D 4 HOH A 59 459 11 HOH HOH . 
D 4 HOH A 60 460 19 HOH HOH . 
D 4 HOH A 61 461 134 HOH HOH . 
D 4 HOH A 62 462 88 HOH HOH . 
D 4 HOH A 63 463 43 HOH HOH . 
D 4 HOH A 64 464 101 HOH HOH . 
D 4 HOH A 65 465 17 HOH HOH . 
D 4 HOH A 66 466 31 HOH HOH . 
D 4 HOH A 67 467 100 HOH HOH . 
D 4 HOH A 68 468 64 HOH HOH . 
D 4 HOH A 69 469 112 HOH HOH . 
D 4 HOH A 70 470 66 HOH HOH . 
D 4 HOH A 71 471 79 HOH HOH . 
D 4 HOH A 72 472 25 HOH HOH . 
D 4 HOH A 73 473 28 HOH HOH . 
D 4 HOH A 74 474 22 HOH HOH . 
D 4 HOH A 75 475 40 HOH HOH . 
D 4 HOH A 76 476 125 HOH HOH . 
D 4 HOH A 77 477 93 HOH HOH . 
D 4 HOH A 78 478 46 HOH HOH . 
D 4 HOH A 79 479 62 HOH HOH . 
D 4 HOH A 80 480 85 HOH HOH . 
D 4 HOH A 81 481 129 HOH HOH . 
D 4 HOH A 82 482 41 HOH HOH . 
D 4 HOH A 83 483 47 HOH HOH . 
D 4 HOH A 84 484 69 HOH HOH . 
D 4 HOH A 85 485 133 HOH HOH . 
D 4 HOH A 86 486 96 HOH HOH . 
D 4 HOH A 87 487 103 HOH HOH . 
D 4 HOH A 88 488 115 HOH HOH . 
D 4 HOH A 89 489 9 HOH HOH . 
D 4 HOH A 90 490 113 HOH HOH . 
D 4 HOH A 91 491 48 HOH HOH . 
D 4 HOH A 92 492 120 HOH HOH . 
D 4 HOH A 93 493 108 HOH HOH . 
D 4 HOH A 94 494 55 HOH HOH . 
D 4 HOH A 95 495 60 HOH HOH . 
D 4 HOH A 96 496 81 HOH HOH . 
D 4 HOH A 97 497 116 HOH HOH . 
D 4 HOH A 98 498 94 HOH HOH . 
D 4 HOH A 99 499 90 HOH HOH . 
D 4 HOH A 100 500 107 HOH HOH . 
D 4 HOH A 101 501 4 HOH HOH . 
D 4 HOH A 102 502 14 HOH HOH . 
D 4 HOH A 103 503 91 HOH HOH . 
D 4 HOH A 104 504 51 HOH HOH . 
D 4 HOH A 105 505 109 HOH HOH . 
D 4 HOH A 106 506 99 HOH HOH . 
D 4 HOH A 107 507 132 HOH HOH . 
D 4 HOH A 108 508 35 HOH HOH . 
D 4 HOH A 109 509 44 HOH HOH . 
D 4 HOH A 110 510 59 HOH HOH . 
D 4 HOH A 111 511 124 HOH HOH . 
D 4 HOH A 112 512 26 HOH HOH . 
D 4 HOH A 113 513 117 HOH HOH . 
D 4 HOH A 114 514 37 HOH HOH . 
D 4 HOH A 115 515 126 HOH HOH . 
D 4 HOH A 116 516 106 HOH HOH . 
D 4 HOH A 117 517 83 HOH HOH . 
D 4 HOH A 118 518 127 HOH HOH . 
D 4 HOH A 119 519 123 HOH HOH . 
D 4 HOH A 120 520 139 HOH HOH . 
D 4 HOH A 121 521 140 HOH HOH . 
D 4 HOH A 122 522 114 HOH HOH . 
D 4 HOH A 123 523 137 HOH HOH . 
D 4 HOH A 124 524 84 HOH HOH . 
D 4 HOH A 125 525 78 HOH HOH . 
D 4 HOH A 126 526 121 HOH HOH . 
D 4 HOH A 127 527 138 HOH HOH . 
D 4 HOH A 128 528 122 HOH HOH . 
D 4 HOH A 129 529 86 HOH HOH . 
D 4 HOH A 130 530 143 HOH HOH . 
D 4 HOH A 131 531 105 HOH HOH . 
D 4 HOH A 132 532 111 HOH HOH . 
D 4 HOH A 133 533 142 HOH HOH . 
D 4 HOH A 134 534 141 HOH HOH . 
D 4 HOH A 135 535 75 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MER . . . B 2 4.493 -22.116 -16.879 1 38.62 ? C1 MER 301 A 1 
HETATM 2 C C2 MER . . . B 2 6.612 -23.904 -13.47 1 50.66 ? C2 MER 301 A 1 
HETATM 3 C C3 MER . . . B 2 5.811 -21.79 -16.222 1 36.32 ? C3 MER 301 A 1 
HETATM 4 C C4 MER . . . B 2 6.316 -23.072 -15.592 1 44 ? C4 MER 301 A 1 
HETATM 5 C C5 MER . . . B 2 5.392 -24.229 -13.902 1 37.98 ? C5 MER 301 A 1 
HETATM 6 O O6 MER . . . B 2 3.574 -21.599 -16.282 1 30.54 ? O6 MER 301 A 1 
HETATM 7 C C7 MER . . . B 2 6.813 -21.032 -17.109 1 47.99 ? C7 MER 301 A 1 
HETATM 8 O O8 MER . . . B 2 6.263 -20.759 -18.389 1 45.54 ? O8 MER 301 A 1 
HETATM 9 C C9 MER . . . B 2 8.135 -21.763 -17.293 1 42.2 ? C9 MER 301 A 1 
HETATM 10 N N10 MER . . . B 2 5.163 -23.843 -15.14 1 36.74 ? N10 MER 301 A 1 
HETATM 11 C C11 MER . . . B 2 4.359 -24.88 -13.189 1 39.88 ? C11 MER 301 A 1 
HETATM 12 O O12 MER . . . B 2 3.249 -24.412 -13.401 1 41.92 ? O12 MER 301 A 1 
HETATM 13 O O13 MER . . . B 2 4.607 -25.844 -12.433 1 55.43 ? O13 MER 301 A 1 
HETATM 14 S S14 MER . . . B 2 7.506 -24.603 -12.244 1 60.91 ? S14 MER 301 A 1 
HETATM 15 C C15 MER . . . B 2 8.08 -26.143 -12.956 1 58.68 ? C15 MER 301 A 1 
HETATM 16 C C16 MER . . . B 2 9.489 -26.544 -12.549 1 59.99 ? C16 MER 301 A 1 
HETATM 17 C C17 MER . . . B 2 9.504 -28.066 -12.435 1 63.68 ? C17 MER 301 A 1 
HETATM 18 C C18 MER . . . B 2 7.204 -22.863 -14.345 1 41.3 ? C18 MER 301 A 1 
HETATM 19 N N19 MER . . . B 2 8.133 -28.515 -12.742 1 66.77 ? N19 MER 301 A 1 
HETATM 20 C C20 MER . . . B 2 7.101 -21.46 -13.727 1 36.73 ? C20 MER 301 A 1 
HETATM 21 C C21 MER . . . B 2 7.267 -27.347 -12.498 1 63.02 ? C21 MER 301 A 1 
HETATM 22 C C22 MER . . . B 2 9.842 -28.423 -11.014 1 75.46 ? C22 MER 301 A 1 
HETATM 23 N N23 MER . . . B 2 11.106 -28.796 -10.762 1 72.15 ? N23 MER 301 A 1 
HETATM 24 O O24 MER . . . B 2 8.979 -28.337 -10.14 1 80.28 ? O24 MER 301 A 1 
HETATM 25 C C25 MER . . . B 2 12.05 -29.193 -11.804 1 62.26 ? C25 MER 301 A 1 
HETATM 26 C C26 MER . . . B 2 11.643 -28.824 -9.406 1 71.98 ? C26 MER 301 A 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           26 
#