data_9O4J # _model_server_result.job_id 0OlTeqVvMkC8lW-d5tPs0Q _model_server_result.datetime_utc '2025-07-28 16:22:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9o4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 9O4J # _exptl.entry_id 9O4J _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 346.374 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GIBBERELLIN A3' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9O4J _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9O4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H22 O6' _chem_comp.formula_weight 346.374 _chem_comp.id GA3 _chem_comp.mon_nstd_flag . _chem_comp.name 'GIBBERELLIN A3' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(1S,2S,4aR,4bR,7S,9aS,10S,10aR)-2,7-dihydroxy-1-methyl-8-methylidene-13-oxo-1,2,4b,5,6,7,8,9,10,10a-decahydro-4a,1-(epo xymethano)-7,9a-methanobenzo[a]azulene-10-carboxylic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O71 C7 GA3 sing 83 n n C7 O72 GA3 doub 84 n n C7 C6 GA3 sing 85 n n C6 C5 GA3 sing 86 n n C6 C8 GA3 sing 87 n n C5 C10 GA3 sing 88 n n C5 C4 GA3 sing 89 n n C8 C15 GA3 sing 90 n n C8 C14 GA3 sing 91 n n C8 C9 GA3 sing 92 n n C15 C16 GA3 sing 93 n n C16 C17 GA3 doub 94 n n C16 C13 GA3 sing 95 n n C13 C14 GA3 sing 96 n n C13 O13 GA3 sing 97 n n C13 C12 GA3 sing 98 n n C12 C11 GA3 sing 99 n n C11 C9 GA3 sing 100 n n C9 C10 GA3 sing 101 n n C10 O92 GA3 sing 102 n n C10 C1 GA3 sing 103 n n O92 C19 GA3 sing 104 n n C1 C2 GA3 doub 105 n n C2 C3 GA3 sing 106 n n C3 O31 GA3 sing 107 n n C3 C4 GA3 sing 108 n n C4 C18 GA3 sing 109 n n C4 C19 GA3 sing 110 n n C19 O91 GA3 doub 111 n n O71 HO71 GA3 sing 112 n n C6 H6 GA3 sing 113 n n C5 H5 GA3 sing 114 n n C15 H15 GA3 sing 115 n n C15 H15A GA3 sing 116 n n C17 H17 GA3 sing 117 n n C17 H17A GA3 sing 118 n n C14 H14 GA3 sing 119 n n C14 H14A GA3 sing 120 n n O13 HO13 GA3 sing 121 n n C12 H12 GA3 sing 122 n n C12 H12A GA3 sing 123 n n C11 H11 GA3 sing 124 n n C11 H11A GA3 sing 125 n n C9 H9 GA3 sing 126 n n C1 H1 GA3 sing 127 n n C2 H2 GA3 sing 128 n n C3 H3 GA3 sing 129 n n O31 HO31 GA3 sing 130 n n C18 H18 GA3 sing 131 n n C18 H18A GA3 sing 132 n n C18 H18B GA3 sing 133 n n # _atom_sites.entry_id 9O4J _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id GA3 _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id GA3 _pdbx_nonpoly_scheme.auth_mon_id GA3 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O71 GA3 . . . C 3 126.425 121.222 108.26 1 97.95 ? O71 GA3 401 B 1 HETATM 2 C C7 GA3 . . . C 3 127.025 120.794 107.255 1 97.08 ? C7 GA3 401 B 1 HETATM 3 O O72 GA3 . . . C 3 126.671 120.927 106.067 1 93.19 ? O72 GA3 401 B 1 HETATM 4 C C6 GA3 . . . C 3 128.335 120.028 107.507 1 94.43 ? C6 GA3 401 B 1 HETATM 5 C C5 GA3 . . . C 3 129.175 120.639 108.636 1 93.28 ? C5 GA3 401 B 1 HETATM 6 C C8 GA3 . . . C 3 128.071 118.555 107.94 1 87.55 ? C8 GA3 401 B 1 HETATM 7 C C15 GA3 . . . C 3 126.627 118.06 108.096 1 86.17 ? C15 GA3 401 B 1 HETATM 8 C C16 GA3 . . . C 3 126.789 116.562 108.091 1 86.9 ? C16 GA3 401 B 1 HETATM 9 C C17 GA3 . . . C 3 125.865 115.672 108.42 1 83.86 ? C17 GA3 401 B 1 HETATM 10 C C13 GA3 . . . C 3 128.148 116.235 107.482 1 83.77 ? C13 GA3 401 B 1 HETATM 11 C C14 GA3 . . . C 3 128.556 117.563 106.876 1 83.59 ? C14 GA3 401 B 1 HETATM 12 O O13 GA3 . . . C 3 128.103 115.227 106.51 1 86.98 ? O13 GA3 401 B 1 HETATM 13 C C12 GA3 . . . C 3 129.191 115.924 108.556 1 79.82 ? C12 GA3 401 B 1 HETATM 14 C C11 GA3 . . . C 3 129.165 116.948 109.688 1 85.41 ? C11 GA3 401 B 1 HETATM 15 C C9 GA3 . . . C 3 128.803 118.384 109.293 1 88.81 ? C9 GA3 401 B 1 HETATM 16 C C10 GA3 . . . C 3 129.855 119.463 109.322 1 89.48 ? C10 GA3 401 B 1 HETATM 17 O O92 GA3 . . . C 3 130.976 119.186 108.436 1 94.7 ? O92 GA3 401 B 1 HETATM 18 C C1 GA3 . . . C 3 130.452 119.871 110.634 1 88.12 ? C1 GA3 401 B 1 HETATM 19 C C2 GA3 . . . C 3 130.992 121.079 110.723 1 96.82 ? C2 GA3 401 B 1 HETATM 20 C C3 GA3 . . . C 3 130.951 122.078 109.59 1 103.56 ? C3 GA3 401 B 1 HETATM 21 O O31 GA3 . . . C 3 130.092 123.145 109.921 1 101.61 ? O31 GA3 401 B 1 HETATM 22 C C4 GA3 . . . C 3 130.409 121.454 108.281 1 99.53 ? C4 GA3 401 B 1 HETATM 23 C C18 GA3 . . . C 3 130.265 122.494 107.187 1 97.73 ? C18 GA3 401 B 1 HETATM 24 C C19 GA3 . . . C 3 131.375 120.338 107.899 1 100.2 ? C19 GA3 401 B 1 HETATM 25 O O91 GA3 . . . C 3 132.362 120.413 107.219 1 102.25 ? O91 GA3 401 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #