data_9OVJ # _model_server_result.job_id M3tWobLbFZ5KWvl8SMoXlA _model_server_result.datetime_utc '2025-06-28 18:19:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9ovj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 9OVJ # _exptl.entry_id 9OVJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 500.93 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(2R)-{2-[(4-chloro[1,1'-biphenyl]-3-yl)methoxy]phenyl}[(2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)amino]acetic acid" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9OVJ _cell.length_a 37.839 _cell.length_b 70.137 _cell.length_c 199.041 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9OVJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASN 240 A ASN 317 1_555 C K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc2 A O ARG 263 A ARG 340 1_555 C K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? # _chem_comp.formula 'C28 H21 Cl N2 O5' _chem_comp.formula_weight 500.93 _chem_comp.id A1CF1 _chem_comp.mon_nstd_flag . _chem_comp.name "(2R)-{2-[(4-chloro[1,1'-biphenyl]-3-yl)methoxy]phenyl}[(2-oxo-2,3-dihydro-1,3-benzoxazol-5-yl)amino]acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 A1CF1 doub 1 n n C1 O2 A1CF1 sing 2 n n C1 C2 A1CF1 sing 3 n n C2 N1 A1CF1 sing 4 n n C2 C10 A1CF1 sing 5 n n N1 C3 A1CF1 sing 6 n n C3 C4 A1CF1 doub 7 n y C3 C9 A1CF1 sing 8 n y C4 C5 A1CF1 sing 9 n y C5 C6 A1CF1 doub 10 n y C6 O3 A1CF1 sing 11 n n C6 C8 A1CF1 sing 12 n y O3 C7 A1CF1 sing 13 n n C7 O4 A1CF1 doub 14 n n C7 N2 A1CF1 sing 15 n n N2 C8 A1CF1 sing 16 n n C8 C9 A1CF1 doub 17 n y C10 C11 A1CF1 doub 18 n y C10 C15 A1CF1 sing 19 n y C11 C12 A1CF1 sing 20 n y C12 C13 A1CF1 doub 21 n y C13 C14 A1CF1 sing 22 n y C14 C15 A1CF1 doub 23 n y C15 O5 A1CF1 sing 24 n n O5 C16 A1CF1 sing 25 n n C16 C17 A1CF1 sing 26 n n C17 C18 A1CF1 doub 27 n y C17 C28 A1CF1 sing 28 n y C18 C19 A1CF1 sing 29 n y C19 C20 A1CF1 sing 30 n n C19 C26 A1CF1 doub 31 n y C20 C21 A1CF1 doub 32 n y C20 C25 A1CF1 sing 33 n y C21 C22 A1CF1 sing 34 n y C22 C23 A1CF1 doub 35 n y C23 C24 A1CF1 sing 36 n y C24 C25 A1CF1 doub 37 n y C26 C27 A1CF1 sing 38 n y C27 C28 A1CF1 doub 39 n y C28 CL1 A1CF1 sing 40 n n C2 H2 A1CF1 sing 41 n n O2 H1 A1CF1 sing 42 n n C11 H8 A1CF1 sing 43 n n C12 H9 A1CF1 sing 44 n n C13 H10 A1CF1 sing 45 n n C14 H11 A1CF1 sing 46 n n C16 H12 A1CF1 sing 47 n n C16 H13 A1CF1 sing 48 n n C18 H14 A1CF1 sing 49 n n C21 H15 A1CF1 sing 50 n n C22 H16 A1CF1 sing 51 n n C23 H17 A1CF1 sing 52 n n C24 H18 A1CF1 sing 53 n n C25 H19 A1CF1 sing 54 n n C26 H20 A1CF1 sing 55 n n C27 H21 A1CF1 sing 56 n n C4 H4 A1CF1 sing 57 n n C5 H5 A1CF1 sing 58 n n C9 H7 A1CF1 sing 59 n n N1 H3 A1CF1 sing 60 n n N2 H6 A1CF1 sing 61 n n # _atom_sites.entry_id 9OVJ _atom_sites.fract_transf_matrix[1][1] 0.026428 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005024 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1CF1 A 1 601 1 A1CF1 LI1 . C 3 K A 1 602 1 K K . D 4 HOH A 1 701 40 HOH HOH . D 4 HOH A 2 702 13 HOH HOH . D 4 HOH A 3 703 84 HOH HOH . D 4 HOH A 4 704 20 HOH HOH . D 4 HOH A 5 705 50 HOH HOH . D 4 HOH A 6 706 49 HOH HOH . D 4 HOH A 7 707 15 HOH HOH . D 4 HOH A 8 708 81 HOH HOH . D 4 HOH A 9 709 4 HOH HOH . D 4 HOH A 10 710 43 HOH HOH . D 4 HOH A 11 711 69 HOH HOH . D 4 HOH A 12 712 57 HOH HOH . D 4 HOH A 13 713 12 HOH HOH . D 4 HOH A 14 714 8 HOH HOH . D 4 HOH A 15 715 46 HOH HOH . D 4 HOH A 16 716 9 HOH HOH . D 4 HOH A 17 717 87 HOH HOH . D 4 HOH A 18 718 38 HOH HOH . D 4 HOH A 19 719 44 HOH HOH . D 4 HOH A 20 720 7 HOH HOH . D 4 HOH A 21 721 48 HOH HOH . D 4 HOH A 22 722 16 HOH HOH . D 4 HOH A 23 723 68 HOH HOH . D 4 HOH A 24 724 45 HOH HOH . D 4 HOH A 25 725 17 HOH HOH . D 4 HOH A 26 726 66 HOH HOH . D 4 HOH A 27 727 74 HOH HOH . D 4 HOH A 28 728 25 HOH HOH . D 4 HOH A 29 729 37 HOH HOH . D 4 HOH A 30 730 2 HOH HOH . D 4 HOH A 31 731 39 HOH HOH . D 4 HOH A 32 732 23 HOH HOH . D 4 HOH A 33 733 79 HOH HOH . D 4 HOH A 34 734 54 HOH HOH . D 4 HOH A 35 735 53 HOH HOH . D 4 HOH A 36 736 6 HOH HOH . D 4 HOH A 37 737 35 HOH HOH . D 4 HOH A 38 738 14 HOH HOH . D 4 HOH A 39 739 11 HOH HOH . D 4 HOH A 40 740 83 HOH HOH . D 4 HOH A 41 741 62 HOH HOH . D 4 HOH A 42 742 72 HOH HOH . D 4 HOH A 43 743 63 HOH HOH . D 4 HOH A 44 744 60 HOH HOH . D 4 HOH A 45 745 58 HOH HOH . D 4 HOH A 46 746 52 HOH HOH . D 4 HOH A 47 747 47 HOH HOH . D 4 HOH A 48 748 85 HOH HOH . D 4 HOH A 49 749 82 HOH HOH . D 4 HOH A 50 750 67 HOH HOH . D 4 HOH A 51 751 75 HOH HOH . D 4 HOH A 52 752 78 HOH HOH . D 4 HOH A 53 753 41 HOH HOH . D 4 HOH A 54 754 86 HOH HOH . D 4 HOH A 55 755 80 HOH HOH . D 4 HOH A 56 756 89 HOH HOH . D 4 HOH A 57 757 61 HOH HOH . D 4 HOH A 58 758 64 HOH HOH . D 4 HOH A 59 759 76 HOH HOH . D 4 HOH A 60 760 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1CF1 . . . B 2 5.637 -3.054 -37.018 1 38.13 ? C1 A1CF1 601 A 1 HETATM 2 C C2 A1CF1 . . . B 2 5.237 -1.577 -36.545 1 37.96 ? C2 A1CF1 601 A 1 HETATM 3 C C3 A1CF1 . . . B 2 6.194 -1.685 -34.169 1 35.42 ? C3 A1CF1 601 A 1 HETATM 4 O O1 A1CF1 . . . B 2 4.904 -4.03 -36.631 1 43.4 ? O1 A1CF1 601 A 1 HETATM 5 O O2 A1CF1 . . . B 2 6.795 -3.248 -37.829 1 39.78 -1 O2 A1CF1 601 A 1 HETATM 6 O O3 A1CF1 . . . B 2 9.773 -2.053 -31.794 1 31.02 ? O3 A1CF1 601 A 1 HETATM 7 C C11 A1CF1 . . . B 2 2.791 -1.996 -37.612 1 46.93 ? C11 A1CF1 601 A 1 HETATM 8 C C12 A1CF1 . . . B 2 1.611 -1.46 -38.319 1 48.62 ? C12 A1CF1 601 A 1 HETATM 9 C C13 A1CF1 . . . B 2 1.569 -0.039 -38.728 1 51.2 ? C13 A1CF1 601 A 1 HETATM 10 C C14 A1CF1 . . . B 2 2.701 0.846 -38.431 1 44.63 ? C14 A1CF1 601 A 1 HETATM 11 C C15 A1CF1 . . . B 2 3.872 0.294 -37.715 1 44.83 ? C15 A1CF1 601 A 1 HETATM 12 C C16 A1CF1 . . . B 2 4.781 2.51 -37.219 1 43.7 ? C16 A1CF1 601 A 1 HETATM 13 C C17 A1CF1 . . . B 2 5.711 3.132 -36.087 1 40.23 ? C17 A1CF1 601 A 1 HETATM 14 C C18 A1CF1 . . . B 2 5.905 2.468 -34.787 1 38.22 ? C18 A1CF1 601 A 1 HETATM 15 C C19 A1CF1 . . . B 2 6.758 3.069 -33.753 1 35.4 ? C19 A1CF1 601 A 1 HETATM 16 C C20 A1CF1 . . . B 2 6.949 2.351 -32.416 1 36.76 ? C20 A1CF1 601 A 1 HETATM 17 C C21 A1CF1 . . . B 2 5.927 1.413 -31.905 1 38.42 ? C21 A1CF1 601 A 1 HETATM 18 C C22 A1CF1 . . . B 2 6.127 0.715 -30.622 1 38.06 ? C22 A1CF1 601 A 1 HETATM 19 C C23 A1CF1 . . . B 2 7.359 0.947 -29.85 1 40.67 ? C23 A1CF1 601 A 1 HETATM 20 C C24 A1CF1 . . . B 2 8.387 1.875 -30.365 1 37.35 ? C24 A1CF1 601 A 1 HETATM 21 C C25 A1CF1 . . . B 2 8.184 2.573 -31.644 1 34.28 ? C25 A1CF1 601 A 1 HETATM 22 C C26 A1CF1 . . . B 2 7.439 4.343 -34.02 1 36 ? C26 A1CF1 601 A 1 HETATM 23 C C27 A1CF1 . . . B 2 7.246 5.018 -35.312 1 38 ? C27 A1CF1 601 A 1 HETATM 24 C C28 A1CF1 . . . B 2 6.383 4.404 -36.342 1 40.49 ? C28 A1CF1 601 A 1 HETATM 25 C C10 A1CF1 . . . B 2 3.946 -1.121 -37.304 1 44.05 ? C10 A1CF1 601 A 1 HETATM 26 C C4 A1CF1 . . . B 2 6.076 -2.445 -32.903 1 32.27 ? C4 A1CF1 601 A 1 HETATM 27 C C5 A1CF1 . . . B 2 7.247 -2.629 -32.027 1 32.66 ? C5 A1CF1 601 A 1 HETATM 28 C C6 A1CF1 . . . B 2 8.511 -2.028 -32.449 1 31.32 ? C6 A1CF1 601 A 1 HETATM 29 C C7 A1CF1 . . . B 2 10.702 -1.319 -32.579 1 33.1 ? C7 A1CF1 601 A 1 HETATM 30 C C8 A1CF1 . . . B 2 8.611 -1.286 -33.663 1 30.98 ? C8 A1CF1 601 A 1 HETATM 31 C C9 A1CF1 . . . B 2 7.489 -1.084 -34.57 1 33.97 ? C9 A1CF1 601 A 1 HETATM 32 N N1 A1CF1 . . . B 2 5.043 -1.515 -35.042 1 36.54 ? N1 A1CF1 601 A 1 HETATM 33 N N2 A1CF1 . . . B 2 9.976 -0.844 -33.735 1 31.38 ? N2 A1CF1 601 A 1 HETATM 34 O O4 A1CF1 . . . B 2 11.947 -1.142 -32.298 1 38.07 ? O4 A1CF1 601 A 1 HETATM 35 O O5 A1CF1 . . . B 2 5.021 1.065 -37.363 1 41.04 ? O5 A1CF1 601 A 1 HETATM 36 CL CL1 A1CF1 . . . B 2 6.13 5.183 -37.962 1 65.7 ? CL1 A1CF1 601 A 1 HETATM 37 H H2 A1CF1 . . . B 2 6.142 -0.967 -36.89 1 45.46 ? H2 A1CF1 601 A 1 HETATM 38 H H8 A1CF1 . . . B 2 2.813 -3.088 -37.304 1 56.22 ? H8 A1CF1 601 A 1 HETATM 39 H H9 A1CF1 . . . B 2 0.732 -2.142 -38.548 1 58.25 ? H9 A1CF1 601 A 1 HETATM 40 H H10 A1CF1 . . . B 2 0.66 0.367 -39.272 1 61.34 ? H10 A1CF1 601 A 1 HETATM 41 H H11 A1CF1 . . . B 2 2.653 1.93 -38.756 1 53.46 ? H11 A1CF1 601 A 1 HETATM 42 H H12 A1CF1 . . . B 2 3.695 2.73 -36.924 1 52.35 ? H12 A1CF1 601 A 1 HETATM 43 H H13 A1CF1 . . . B 2 5.007 3.074 -38.191 1 52.35 ? H13 A1CF1 601 A 1 HETATM 44 H H14 A1CF1 . . . B 2 5.391 1.481 -34.575 1 45.77 ? H14 A1CF1 601 A 1 HETATM 45 H H15 A1CF1 . . . B 2 4.979 1.223 -32.497 1 46.01 ? H15 A1CF1 601 A 1 HETATM 46 H H16 A1CF1 . . . B 2 5.336 0.001 -30.23 1 45.58 ? H16 A1CF1 601 A 1 HETATM 47 H H17 A1CF1 . . . B 2 7.517 0.413 -28.861 1 48.71 ? H17 A1CF1 601 A 1 HETATM 48 H H18 A1CF1 . . . B 2 9.337 2.05 -29.771 1 44.72 ? H18 A1CF1 601 A 1 HETATM 49 H H19 A1CF1 . . . B 2 8.983 3.28 -32.028 1 41.04 ? H19 A1CF1 601 A 1 HETATM 50 H H20 A1CF1 . . . B 2 8.113 4.81 -33.236 1 43.1 ? H20 A1CF1 601 A 1 HETATM 51 H H21 A1CF1 . . . B 2 7.759 6.008 -35.52 1 45.51 ? H21 A1CF1 601 A 1 HETATM 52 H H4 A1CF1 . . . B 2 5.083 -2.894 -32.593 1 38.64 ? H4 A1CF1 601 A 1 HETATM 53 H H5 A1CF1 . . . B 2 7.171 -3.216 -31.059 1 39.11 ? H5 A1CF1 601 A 1 HETATM 54 H H7 A1CF1 . . . B 2 7.607 -0.495 -35.532 1 40.67 ? H7 A1CF1 601 A 1 HETATM 55 H H3 A1CF1 . . . B 2 4.392 -0.702 -34.822 1 43.75 ? H3 A1CF1 601 A 1 HETATM 56 H H6 A1CF1 . . . B 2 10.428 -0.261 -34.492 1 37.56 ? H6 A1CF1 601 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 397 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 56 #