data_9QK6
#
_model_server_result.job_id            3Y-pab3XrclIjBDIgNMIJg 
_model_server_result.datetime_utc      '2025-07-18 19:55:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9qk6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    9QK6 
#
_exptl.entry_id    9QK6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              341.358 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{S})-2-[[(~{E})-3-(3-methoxy-4-oxidanyl-phenyl)prop-2-enoyl]amino]-3-phenyl-propanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9QK6 
_cell.length_a            90.042 
_cell.length_b            90.042 
_cell.length_c            50.997 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9QK6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    'P 32 2"' 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -16.999 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C19 H19 N O5' 
_chem_comp.formula_weight    341.358 
_chem_comp.id                A1I70 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{S})-2-[[(~{E})-3-(3-methoxy-4-oxidanyl-phenyl)prop-2-enoyl]amino]-3-phenyl-propanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 A1I70 doub 1 n y 
C1 C6 A1I70 sing 2 n y 
C2 C3 A1I70 sing 3 n y 
C2 O24 A1I70 sing 4 n n 
C3 C4 A1I70 doub 5 n y 
C3 O11 A1I70 sing 6 n n 
C4 C5 A1I70 sing 7 n y 
C5 C6 A1I70 doub 8 n y 
C6 C7 A1I70 sing 9 n n 
C7 C8 A1I70 doub 10 e n 
C8 C9 A1I70 sing 11 n n 
C9 O10 A1I70 doub 12 n n 
C9 N23 A1I70 sing 13 n n 
C12 C13 A1I70 sing 14 n y 
C12 C17 A1I70 doub 15 n y 
C13 C14 A1I70 doub 16 n y 
C14 C15 A1I70 sing 17 n y 
C15 C16 A1I70 doub 18 n y 
C15 C18 A1I70 sing 19 n n 
C16 C17 A1I70 sing 20 n y 
C18 C19 A1I70 sing 21 n n 
C19 C20 A1I70 sing 22 n n 
C19 N23 A1I70 sing 23 n n 
C20 O21 A1I70 doub 24 n n 
C20 O22 A1I70 sing 25 n n 
O24 C25 A1I70 sing 26 n n 
C4 H27 A1I70 sing 27 n n 
C5 H28 A1I70 sing 28 n n 
C7 H29 A1I70 sing 29 n n 
C8 H30 A1I70 sing 30 n n 
C13 H33 A1I70 sing 31 n n 
C17 H36 A1I70 sing 32 n n 
C1 H26 A1I70 sing 33 n n 
C12 H32 A1I70 sing 34 n n 
C14 H34 A1I70 sing 35 n n 
C16 H35 A1I70 sing 36 n n 
C18 H38 A1I70 sing 37 n n 
C18 H37 A1I70 sing 38 n n 
C19 H39 A1I70 sing 39 n n 
C25 H44 A1I70 sing 40 n n 
C25 H42 A1I70 sing 41 n n 
C25 H43 A1I70 sing 42 n n 
N23 H41 A1I70 sing 43 n n 
O11 H31 A1I70 sing 44 n n 
O22 H1 A1I70 sing 45 n n 
#
_atom_sites.entry_id                     9QK6 
_atom_sites.fract_transf_matrix[1][1]    0.011106 
_atom_sites.fract_transf_matrix[1][2]    0.006412 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012824 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019609 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 A1I70 A 1 301 301 A1I70 LIG . 
C 3 DMS A 1 302 303 DMS DMS . 
D 4 HOH A 1 401 46 HOH HOH . 
D 4 HOH A 2 402 1 HOH HOH . 
D 4 HOH A 3 403 23 HOH HOH . 
D 4 HOH A 4 404 6 HOH HOH . 
D 4 HOH A 5 405 52 HOH HOH . 
D 4 HOH A 6 406 13 HOH HOH . 
D 4 HOH A 7 407 8 HOH HOH . 
D 4 HOH A 8 408 30 HOH HOH . 
D 4 HOH A 9 409 10 HOH HOH . 
D 4 HOH A 10 410 105 HOH HOH . 
D 4 HOH A 11 411 12 HOH HOH . 
D 4 HOH A 12 412 5 HOH HOH . 
D 4 HOH A 13 413 20 HOH HOH . 
D 4 HOH A 14 414 130 HOH HOH . 
D 4 HOH A 15 415 50 HOH HOH . 
D 4 HOH A 16 416 29 HOH HOH . 
D 4 HOH A 17 417 2 HOH HOH . 
D 4 HOH A 18 418 72 HOH HOH . 
D 4 HOH A 19 419 65 HOH HOH . 
D 4 HOH A 20 420 19 HOH HOH . 
D 4 HOH A 21 421 15 HOH HOH . 
D 4 HOH A 22 422 36 HOH HOH . 
D 4 HOH A 23 423 53 HOH HOH . 
D 4 HOH A 24 424 172 HOH HOH . 
D 4 HOH A 25 425 118 HOH HOH . 
D 4 HOH A 26 426 11 HOH HOH . 
D 4 HOH A 27 427 28 HOH HOH . 
D 4 HOH A 28 428 38 HOH HOH . 
D 4 HOH A 29 429 16 HOH HOH . 
D 4 HOH A 30 430 25 HOH HOH . 
D 4 HOH A 31 431 4 HOH HOH . 
D 4 HOH A 32 432 176 HOH HOH . 
D 4 HOH A 33 433 49 HOH HOH . 
D 4 HOH A 34 434 71 HOH HOH . 
D 4 HOH A 35 435 101 HOH HOH . 
D 4 HOH A 36 436 3 HOH HOH . 
D 4 HOH A 37 437 32 HOH HOH . 
D 4 HOH A 38 438 14 HOH HOH . 
D 4 HOH A 39 439 35 HOH HOH . 
D 4 HOH A 40 440 21 HOH HOH . 
D 4 HOH A 41 441 37 HOH HOH . 
D 4 HOH A 42 442 92 HOH HOH . 
D 4 HOH A 43 443 31 HOH HOH . 
D 4 HOH A 44 444 96 HOH HOH . 
D 4 HOH A 45 445 88 HOH HOH . 
D 4 HOH A 46 446 128 HOH HOH . 
D 4 HOH A 47 447 177 HOH HOH . 
D 4 HOH A 48 448 91 HOH HOH . 
D 4 HOH A 49 449 9 HOH HOH . 
D 4 HOH A 50 450 39 HOH HOH . 
D 4 HOH A 51 451 106 HOH HOH . 
D 4 HOH A 52 452 40 HOH HOH . 
D 4 HOH A 53 453 113 HOH HOH . 
D 4 HOH A 54 454 27 HOH HOH . 
D 4 HOH A 55 455 163 HOH HOH . 
D 4 HOH A 56 456 135 HOH HOH . 
D 4 HOH A 57 457 61 HOH HOH . 
D 4 HOH A 58 458 143 HOH HOH . 
D 4 HOH A 59 459 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 A1I70 . . . B 2 2.652 -19.51 -1.132 1 37.57 ? C4 A1I70 301 A 1 
HETATM 2 C C5 A1I70 . . . B 2 2.699 -18.614 -2.191 1 41.85 ? C5 A1I70 301 A 1 
HETATM 3 C C6 A1I70 . . . B 2 3.874 -18.428 -2.923 1 45.98 ? C6 A1I70 301 A 1 
HETATM 4 C C7 A1I70 . . . B 2 4.106 -17.415 -3.97 1 47.16 ? C7 A1I70 301 A 1 
HETATM 5 C C8 A1I70 . . . B 2 3.244 -16.755 -4.708 1 50.07 ? C8 A1I70 301 A 1 
HETATM 6 C C13 A1I70 . . . B 2 3.621 -10.586 -5.736 1 61.09 ? C13 A1I70 301 A 1 
HETATM 7 C C15 A1I70 . . . B 2 5.2 -12.399 -5.55 1 58.42 ? C15 A1I70 301 A 1 
HETATM 8 C C17 A1I70 . . . B 2 4.12 -11.502 -3.59 1 59.06 ? C17 A1I70 301 A 1 
HETATM 9 C C20 A1I70 . . . B 2 6.463 -15.163 -7.839 1 56.34 ? C20 A1I70 301 A 1 
HETATM 10 C C1 A1I70 . . . B 2 5 -19.17 -2.569 1 37.29 ? C1 A1I70 301 A 1 
HETATM 11 C C12 A1I70 . . . B 2 3.43 -10.595 -4.369 1 61.67 ? C12 A1I70 301 A 1 
HETATM 12 C C14 A1I70 . . . B 2 4.501 -11.48 -6.324 1 59.69 ? C14 A1I70 301 A 1 
HETATM 13 C C16 A1I70 . . . B 2 4.999 -12.398 -4.175 1 60.53 ? C16 A1I70 301 A 1 
HETATM 14 C C18 A1I70 . . . B 2 6.146 -13.386 -6.187 1 55.86 ? C18 A1I70 301 A 1 
HETATM 15 C C19 A1I70 . . . B 2 5.443 -14.585 -6.847 1 52.95 ? C19 A1I70 301 A 1 
HETATM 16 C C2 A1I70 . . . B 2 4.955 -20.059 -1.514 1 44.56 ? C2 A1I70 301 A 1 
HETATM 17 C C25 A1I70 . . . B 2 7.308 -20.307 -1.517 1 44.35 ? C25 A1I70 301 A 1 
HETATM 18 C C3 A1I70 . . . B 2 3.776 -20.244 -0.785 1 40.77 ? C3 A1I70 301 A 1 
HETATM 19 C C9 A1I70 . . . B 2 3.648 -15.75 -5.72 1 46.42 ? C9 A1I70 301 A 1 
HETATM 20 N N23 A1I70 . . . B 2 4.975 -15.565 -5.871 1 53.78 ? N23 A1I70 301 A 1 
HETATM 21 O O10 A1I70 . . . B 2 2.821 -15.113 -6.383 1 56.69 ? O10 A1I70 301 A 1 
HETATM 22 O O11 A1I70 . . . B 2 3.767 -21.169 0.226 1 36.16 ? O11 A1I70 301 A 1 
HETATM 23 O O21 A1I70 . . . B 2 7.344 -15.918 -7.389 1 60.22 ? O21 A1I70 301 A 1 
HETATM 24 O O22 A1I70 . . . B 2 6.377 -14.771 -9.03 1 58.26 ? O22 A1I70 301 A 1 
HETATM 25 O O24 A1I70 . . . B 2 6.036 -20.705 -1.016 1 47.67 ? O24 A1I70 301 A 1 
#
_model_server_stats.io_time_ms              122 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           25 
#