data_9R22 # _model_server_result.job_id -A38FQPYKvtNqnJUOqnf8g _model_server_result.datetime_utc '2025-08-03 21:38:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9r22 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"NA","auth_seq_id":302}' # _entry.id 9R22 # _exptl.entry_id 9R22 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9R22 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9R22 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 L N N ? 4 U N N ? 4 IA N N ? 4 LA N N ? 4 NA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 214 A LYS 214 1_555 K C15 RET . A RET 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale2 B NZ LYS 214 B LYS 214 1_555 T C15 RET . B RET 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale3 C NZ LYS 214 C LYS 214 1_555 DA C15 RET . C RET 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale4 D NZ LYS 214 D LYS 214 1_555 KA C15 RET . D RET 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale5 E NZ LYS 214 E LYS 214 1_555 SA C15 RET . E RET 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 242 n n C1B O1B LMT sing 243 n n C1B O5B LMT sing 244 n n C1B H1B LMT sing 245 n n C2B C3B LMT sing 246 n n C2B O2B LMT sing 247 n n C2B H2B LMT sing 248 n n C3B C4B LMT sing 249 n n C3B O3B LMT sing 250 n n C3B H3B LMT sing 251 n n C4B C5B LMT sing 252 n n C4B O4' LMT sing 253 n n C4B H4B LMT sing 254 n n C5B C6B LMT sing 255 n n C5B O5B LMT sing 256 n n C5B H5B LMT sing 257 n n C6B O6B LMT sing 258 n n C6B "H6'2" LMT sing 259 n n C6B "H6'1" LMT sing 260 n n O1B C4' LMT sing 261 n n O2B H2O1 LMT sing 262 n n O3B H3O1 LMT sing 263 n n O4' H4O1 LMT sing 264 n n O6B H6B LMT sing 265 n n C1' C2' LMT sing 266 n n C1' O1' LMT sing 267 n n C1' O5' LMT sing 268 n n C1' H1' LMT sing 269 n n C2' C3' LMT sing 270 n n C2' O2' LMT sing 271 n n C2' H2' LMT sing 272 n n C3' C4' LMT sing 273 n n C3' O3' LMT sing 274 n n C3' H3' LMT sing 275 n n C4' C5' LMT sing 276 n n C4' H4' LMT sing 277 n n C5' C6' LMT sing 278 n n C5' O5' LMT sing 279 n n C5' H5' LMT sing 280 n n C6' O6' LMT sing 281 n n C6' H6D LMT sing 282 n n C6' H6E LMT sing 283 n n O1' C1 LMT sing 284 n n O2' H2O2 LMT sing 285 n n O3' H3O2 LMT sing 286 n n O6' H6' LMT sing 287 n n C1 C2 LMT sing 288 n n C1 H12 LMT sing 289 n n C1 H11 LMT sing 290 n n C2 C3 LMT sing 291 n n C2 H22 LMT sing 292 n n C2 H21 LMT sing 293 n n C3 C4 LMT sing 294 n n C3 H32 LMT sing 295 n n C3 H31 LMT sing 296 n n C4 C5 LMT sing 297 n n C4 H42 LMT sing 298 n n C4 H41 LMT sing 299 n n C5 C6 LMT sing 300 n n C5 H52 LMT sing 301 n n C5 H51 LMT sing 302 n n C6 C7 LMT sing 303 n n C6 H62 LMT sing 304 n n C6 H61 LMT sing 305 n n C7 C8 LMT sing 306 n n C7 H72 LMT sing 307 n n C7 H71 LMT sing 308 n n C8 C9 LMT sing 309 n n C8 H82 LMT sing 310 n n C8 H81 LMT sing 311 n n C9 C10 LMT sing 312 n n C9 H92 LMT sing 313 n n C9 H91 LMT sing 314 n n C10 C11 LMT sing 315 n n C10 H102 LMT sing 316 n n C10 H101 LMT sing 317 n n C11 C12 LMT sing 318 n n C11 H112 LMT sing 319 n n C11 H111 LMT sing 320 n n C12 H123 LMT sing 321 n n C12 H122 LMT sing 322 n n C12 H121 LMT sing 323 n n # _atom_sites.entry_id 9R22 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 LFA A 1 301 301 LFA LFA . G 2 LFA A 1 302 302 LFA LFA . H 2 LFA A 1 303 303 LFA LFA . I 2 LFA A 1 304 304 LFA LFA . J 2 LFA A 1 305 305 LFA LFA . K 3 RET A 1 306 214 RET LYR . L 4 LMT A 1 307 307 LMT LMT . M 2 LFA A 1 308 309 LFA LFA . N 2 LFA B 1 301 301 LFA LFA . O 2 LFA B 1 302 302 LFA LFA . P 2 LFA B 1 303 303 LFA LFA . Q 2 LFA B 1 304 305 LFA LFA . R 2 LFA B 1 305 306 LFA LFA . S 2 LFA B 1 306 308 LFA LFA . T 3 RET B 1 307 214 RET LYR . U 4 LMT B 1 308 308 LMT LMT . V 2 LFA C 1 301 304 LFA LFA . W 2 LFA C 1 302 301 LFA LFA . X 2 LFA C 1 303 303 LFA LFA . Y 2 LFA C 1 304 304 LFA LFA . Z 2 LFA C 1 305 305 LFA LFA . AA 2 LFA C 1 306 306 LFA LFA . BA 2 LFA C 1 307 307 LFA LFA . CA 2 LFA C 1 308 309 LFA LFA . DA 3 RET C 1 309 214 RET LYR . EA 2 LFA D 1 301 302 LFA LFA . FA 2 LFA D 1 302 301 LFA LFA . GA 2 LFA D 1 303 302 LFA LFA . HA 2 LFA D 1 304 303 LFA LFA . IA 4 LMT D 1 305 305 LMT LMT . JA 2 LFA D 1 306 306 LFA LFA . KA 3 RET D 1 307 214 RET LYR . LA 4 LMT D 1 308 304 LMT LMT . MA 2 LFA E 1 301 307 LFA LFA . NA 4 LMT E 1 302 308 LMT LMT . OA 2 LFA E 1 303 304 LFA LFA . PA 2 LFA E 1 304 301 LFA LFA . QA 2 LFA E 1 305 302 LFA LFA . RA 2 LFA E 1 306 303 LFA LFA . SA 3 RET E 1 307 214 RET LYR . TA 5 HOH A 1 401 110 HOH HOH . TA 5 HOH A 2 402 77 HOH HOH . TA 5 HOH A 3 403 60 HOH HOH . TA 5 HOH A 4 404 94 HOH HOH . TA 5 HOH A 5 405 49 HOH HOH . TA 5 HOH A 6 406 35 HOH HOH . TA 5 HOH A 7 407 86 HOH HOH . TA 5 HOH A 8 408 90 HOH HOH . TA 5 HOH A 9 409 76 HOH HOH . TA 5 HOH A 10 410 97 HOH HOH . TA 5 HOH A 11 411 18 HOH HOH . TA 5 HOH A 12 412 64 HOH HOH . TA 5 HOH A 13 413 50 HOH HOH . TA 5 HOH A 14 414 65 HOH HOH . TA 5 HOH A 15 415 27 HOH HOH . TA 5 HOH A 16 416 10 HOH HOH . TA 5 HOH A 17 417 106 HOH HOH . TA 5 HOH A 18 418 7 HOH HOH . TA 5 HOH A 19 419 66 HOH HOH . TA 5 HOH A 20 420 42 HOH HOH . TA 5 HOH A 21 421 23 HOH HOH . UA 5 HOH B 1 401 111 HOH HOH . UA 5 HOH B 2 402 28 HOH HOH . UA 5 HOH B 3 403 52 HOH HOH . UA 5 HOH B 4 404 95 HOH HOH . UA 5 HOH B 5 405 12 HOH HOH . UA 5 HOH B 6 406 6 HOH HOH . UA 5 HOH B 7 407 36 HOH HOH . UA 5 HOH B 8 408 3 HOH HOH . UA 5 HOH B 9 409 29 HOH HOH . UA 5 HOH B 10 410 91 HOH HOH . UA 5 HOH B 11 411 98 HOH HOH . UA 5 HOH B 12 412 4 HOH HOH . UA 5 HOH B 13 413 69 HOH HOH . UA 5 HOH B 14 414 51 HOH HOH . UA 5 HOH B 15 415 2 HOH HOH . UA 5 HOH B 16 416 68 HOH HOH . UA 5 HOH B 17 417 1 HOH HOH . UA 5 HOH B 18 418 102 HOH HOH . UA 5 HOH B 19 419 67 HOH HOH . UA 5 HOH B 20 420 43 HOH HOH . UA 5 HOH B 21 421 5 HOH HOH . VA 5 HOH C 1 401 107 HOH HOH . VA 5 HOH C 2 402 31 HOH HOH . VA 5 HOH C 3 403 53 HOH HOH . VA 5 HOH C 4 404 54 HOH HOH . VA 5 HOH C 5 405 96 HOH HOH . VA 5 HOH C 6 406 37 HOH HOH . VA 5 HOH C 7 407 32 HOH HOH . VA 5 HOH C 8 408 30 HOH HOH . VA 5 HOH C 9 409 87 HOH HOH . VA 5 HOH C 10 410 99 HOH HOH . VA 5 HOH C 11 411 19 HOH HOH . VA 5 HOH C 12 412 70 HOH HOH . VA 5 HOH C 13 413 55 HOH HOH . VA 5 HOH C 14 414 71 HOH HOH . VA 5 HOH C 15 415 24 HOH HOH . VA 5 HOH C 16 416 11 HOH HOH . VA 5 HOH C 17 417 103 HOH HOH . VA 5 HOH C 18 418 44 HOH HOH . VA 5 HOH C 19 419 72 HOH HOH . VA 5 HOH C 20 420 20 HOH HOH . WA 5 HOH D 1 401 108 HOH HOH . WA 5 HOH D 2 402 39 HOH HOH . WA 5 HOH D 3 403 14 HOH HOH . WA 5 HOH D 4 404 57 HOH HOH . WA 5 HOH D 5 405 92 HOH HOH . WA 5 HOH D 6 406 56 HOH HOH . WA 5 HOH D 7 407 33 HOH HOH . WA 5 HOH D 8 408 13 HOH HOH . WA 5 HOH D 9 409 38 HOH HOH . WA 5 HOH D 10 410 88 HOH HOH . WA 5 HOH D 11 411 79 HOH HOH . WA 5 HOH D 12 412 100 HOH HOH . WA 5 HOH D 13 413 16 HOH HOH . WA 5 HOH D 14 414 75 HOH HOH . WA 5 HOH D 15 415 58 HOH HOH . WA 5 HOH D 16 416 74 HOH HOH . WA 5 HOH D 17 417 25 HOH HOH . WA 5 HOH D 18 418 8 HOH HOH . WA 5 HOH D 19 419 73 HOH HOH . WA 5 HOH D 20 420 104 HOH HOH . WA 5 HOH D 21 421 45 HOH HOH . WA 5 HOH D 22 422 21 HOH HOH . XA 5 HOH E 1 401 109 HOH HOH . XA 5 HOH E 2 402 80 HOH HOH . XA 5 HOH E 3 403 59 HOH HOH . XA 5 HOH E 4 404 93 HOH HOH . XA 5 HOH E 5 405 47 HOH HOH . XA 5 HOH E 6 406 34 HOH HOH . XA 5 HOH E 7 407 40 HOH HOH . XA 5 HOH E 8 408 41 HOH HOH . XA 5 HOH E 9 409 89 HOH HOH . XA 5 HOH E 10 410 101 HOH HOH . XA 5 HOH E 11 411 17 HOH HOH . XA 5 HOH E 12 412 15 HOH HOH . XA 5 HOH E 13 413 61 HOH HOH . XA 5 HOH E 14 414 48 HOH HOH . XA 5 HOH E 15 415 62 HOH HOH . XA 5 HOH E 16 416 26 HOH HOH . XA 5 HOH E 17 417 9 HOH HOH . XA 5 HOH E 18 418 105 HOH HOH . XA 5 HOH E 19 419 63 HOH HOH . XA 5 HOH E 20 420 46 HOH HOH . XA 5 HOH E 21 421 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . NA 4 114.361 124.047 130.326 1 66.72 ? C1B LMT 302 E 1 HETATM 2 C C2B LMT . . . NA 4 114.532 125.313 131.159 1 84.93 ? C2B LMT 302 E 1 HETATM 3 C C3B LMT . . . NA 4 115.689 126.189 130.603 1 76.5 ? C3B LMT 302 E 1 HETATM 4 C C4B LMT . . . NA 4 116.965 125.378 130.437 1 76.09 ? C4B LMT 302 E 1 HETATM 5 C C5B LMT . . . NA 4 116.699 124.034 129.72 1 82.91 ? C5B LMT 302 E 1 HETATM 6 C C6B LMT . . . NA 4 117.909 123.111 129.702 1 82.35 ? C6B LMT 302 E 1 HETATM 7 O O1B LMT . . . NA 4 113.986 124.532 129.058 1 68.89 ? O1B LMT 302 E 1 HETATM 8 O O2B LMT . . . NA 4 113.313 126.057 131.198 1 90.54 ? O2B LMT 302 E 1 HETATM 9 O O3B LMT . . . NA 4 115.938 127.297 131.477 1 70.72 ? O3B LMT 302 E 1 HETATM 10 O O4' LMT . . . NA 4 117.893 126.159 129.693 1 67.71 ? O4' LMT 302 E 1 HETATM 11 O O5B LMT . . . NA 4 115.584 123.317 130.355 1 65.94 ? O5B LMT 302 E 1 HETATM 12 O O6B LMT . . . NA 4 118.347 122.761 131.018 1 87.53 ? O6B LMT 302 E 1 HETATM 13 C C1' LMT . . . NA 4 111.713 121.976 126.694 1 98.9 ? C1' LMT 302 E 1 HETATM 14 C C2' LMT . . . NA 4 113.209 121.678 126.711 1 95.68 ? C2' LMT 302 E 1 HETATM 15 C C3' LMT . . . NA 4 113.844 122.313 127.928 1 78.71 ? C3' LMT 302 E 1 HETATM 16 C C4' LMT . . . NA 4 113.461 123.786 127.948 1 78.26 ? C4' LMT 302 E 1 HETATM 17 C C5' LMT . . . NA 4 111.934 123.941 127.904 1 85.05 ? C5' LMT 302 E 1 HETATM 18 C C6' LMT . . . NA 4 111.428 125.366 127.944 1 96.85 ? C6' LMT 302 E 1 HETATM 19 O O1' LMT . . . NA 4 111.121 121.35 125.603 1 87.18 ? O1' LMT 302 E 1 HETATM 20 O O2' LMT . . . NA 4 113.426 120.268 126.711 1 125.53 ? O2' LMT 302 E 1 HETATM 21 O O3' LMT . . . NA 4 115.249 122.113 127.845 1 80.39 ? O3' LMT 302 E 1 HETATM 22 O O5' LMT . . . NA 4 111.476 123.369 126.652 1 76.43 ? O5' LMT 302 E 1 HETATM 23 O O6' LMT . . . NA 4 110.822 125.813 126.698 1 76.1 ? O6' LMT 302 E 1 HETATM 24 C C1 LMT . . . NA 4 111.33 122.028 124.364 1 73.34 ? C1 LMT 302 E 1 HETATM 25 C C2 LMT . . . NA 4 110.92 121.033 123.354 1 62.4 ? C2 LMT 302 E 1 HETATM 26 C C3 LMT . . . NA 4 109.5 121.158 123.022 1 70.51 ? C3 LMT 302 E 1 HETATM 27 C C4 LMT . . . NA 4 109.267 121.195 121.551 1 80.63 ? C4 LMT 302 E 1 HETATM 28 C C5 LMT . . . NA 4 109.821 120.001 120.843 1 74.45 ? C5 LMT 302 E 1 HETATM 29 C C6 LMT . . . NA 4 110.638 120.334 119.642 1 66.41 ? C6 LMT 302 E 1 HETATM 30 C C7 LMT . . . NA 4 109.891 120.237 118.348 1 58.29 ? C7 LMT 302 E 1 HETATM 31 C C8 LMT . . . NA 4 110.812 119.936 117.223 1 67.38 ? C8 LMT 302 E 1 HETATM 32 C C9 LMT . . . NA 4 110.186 119.644 115.893 1 77.09 ? C9 LMT 302 E 1 HETATM 33 C C10 LMT . . . NA 4 111.184 119.777 114.741 1 88.53 ? C10 LMT 302 E 1 HETATM 34 C C11 LMT . . . NA 4 110.608 120.192 113.4 1 101.16 ? C11 LMT 302 E 1 HETATM 35 C C12 LMT . . . NA 4 111.517 119.975 112.209 1 98.41 ? C12 LMT 302 E 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #