data_9R4R # _model_server_result.job_id Rg75Gz9On8MyWPFVdiP4hQ _model_server_result.datetime_utc '2025-07-20 13:31:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9r4r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":507}' # _entry.id 9R4R # _exptl.entry_id 9R4R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9R4R _cell.length_a 108.128 _cell.length_b 108.128 _cell.length_c 128.633 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9R4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 204 A CYS 204 1_555 A SG CYS 279 A CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 339 A CYS 339 1_555 A SG CYS 345 A CYS 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 9R4R _atom_sites.fract_transf_matrix[1][1] 0.009248 _atom_sites.fract_transf_matrix[1][2] 0.00534 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010679 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007774 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PA1 A 1 501 551 PA1 PA1 . C 3 GOL A 1 502 1 GOL GOL . D 3 GOL A 1 503 2 GOL GOL . E 3 GOL A 1 504 3 GOL GOL . F 3 GOL A 1 505 4 GOL GOL . G 3 GOL A 1 506 5 GOL GOL . H 4 FMT A 1 507 1 FMT FMT . I 5 HOH A 1 601 32 HOH HOH . I 5 HOH A 2 602 60 HOH HOH . I 5 HOH A 3 603 23 HOH HOH . I 5 HOH A 4 604 6 HOH HOH . I 5 HOH A 5 605 4 HOH HOH . I 5 HOH A 6 606 75 HOH HOH . I 5 HOH A 7 607 37 HOH HOH . I 5 HOH A 8 608 3 HOH HOH . I 5 HOH A 9 609 24 HOH HOH . I 5 HOH A 10 610 66 HOH HOH . I 5 HOH A 11 611 92 HOH HOH . I 5 HOH A 12 612 11 HOH HOH . I 5 HOH A 13 613 9 HOH HOH . I 5 HOH A 14 614 73 HOH HOH . I 5 HOH A 15 615 30 HOH HOH . I 5 HOH A 16 616 1 HOH HOH . I 5 HOH A 17 617 10 HOH HOH . I 5 HOH A 18 618 80 HOH HOH . I 5 HOH A 19 619 2 HOH HOH . I 5 HOH A 20 620 25 HOH HOH . I 5 HOH A 21 621 8 HOH HOH . I 5 HOH A 22 622 49 HOH HOH . I 5 HOH A 23 623 22 HOH HOH . I 5 HOH A 24 624 46 HOH HOH . I 5 HOH A 25 625 50 HOH HOH . I 5 HOH A 26 626 79 HOH HOH . I 5 HOH A 27 627 42 HOH HOH . I 5 HOH A 28 628 81 HOH HOH . I 5 HOH A 29 629 28 HOH HOH . I 5 HOH A 30 630 13 HOH HOH . I 5 HOH A 31 631 12 HOH HOH . I 5 HOH A 32 632 7 HOH HOH . I 5 HOH A 33 633 44 HOH HOH . I 5 HOH A 34 634 48 HOH HOH . I 5 HOH A 35 635 27 HOH HOH . I 5 HOH A 36 636 45 HOH HOH . I 5 HOH A 37 637 15 HOH HOH . I 5 HOH A 38 638 20 HOH HOH . I 5 HOH A 39 639 82 HOH HOH . I 5 HOH A 40 640 52 HOH HOH . I 5 HOH A 41 641 39 HOH HOH . I 5 HOH A 42 642 77 HOH HOH . I 5 HOH A 43 643 35 HOH HOH . I 5 HOH A 44 644 29 HOH HOH . I 5 HOH A 45 645 19 HOH HOH . I 5 HOH A 46 646 21 HOH HOH . I 5 HOH A 47 647 63 HOH HOH . I 5 HOH A 48 648 71 HOH HOH . I 5 HOH A 49 649 55 HOH HOH . I 5 HOH A 50 650 64 HOH HOH . I 5 HOH A 51 651 17 HOH HOH . I 5 HOH A 52 652 16 HOH HOH . I 5 HOH A 53 653 59 HOH HOH . I 5 HOH A 54 654 41 HOH HOH . I 5 HOH A 55 655 56 HOH HOH . I 5 HOH A 56 656 101 HOH HOH . I 5 HOH A 57 657 38 HOH HOH . I 5 HOH A 58 658 78 HOH HOH . I 5 HOH A 59 659 94 HOH HOH . I 5 HOH A 60 660 58 HOH HOH . I 5 HOH A 61 661 97 HOH HOH . I 5 HOH A 62 662 87 HOH HOH . I 5 HOH A 63 663 5 HOH HOH . I 5 HOH A 64 664 51 HOH HOH . I 5 HOH A 65 665 95 HOH HOH . I 5 HOH A 66 666 85 HOH HOH . I 5 HOH A 67 667 72 HOH HOH . I 5 HOH A 68 668 14 HOH HOH . I 5 HOH A 69 669 83 HOH HOH . I 5 HOH A 70 670 34 HOH HOH . I 5 HOH A 71 671 84 HOH HOH . I 5 HOH A 72 672 53 HOH HOH . I 5 HOH A 73 673 98 HOH HOH . I 5 HOH A 74 674 69 HOH HOH . I 5 HOH A 75 675 93 HOH HOH . I 5 HOH A 76 676 96 HOH HOH . I 5 HOH A 77 677 68 HOH HOH . I 5 HOH A 78 678 54 HOH HOH . I 5 HOH A 79 679 18 HOH HOH . I 5 HOH A 80 680 76 HOH HOH . I 5 HOH A 81 681 90 HOH HOH . I 5 HOH A 82 682 70 HOH HOH . I 5 HOH A 83 683 33 HOH HOH . I 5 HOH A 84 684 36 HOH HOH . I 5 HOH A 85 685 88 HOH HOH . I 5 HOH A 86 686 57 HOH HOH . I 5 HOH A 87 687 61 HOH HOH . I 5 HOH A 88 688 31 HOH HOH . I 5 HOH A 89 689 86 HOH HOH . I 5 HOH A 90 690 74 HOH HOH . I 5 HOH A 91 691 47 HOH HOH . I 5 HOH A 92 692 40 HOH HOH . I 5 HOH A 93 693 99 HOH HOH . I 5 HOH A 94 694 26 HOH HOH . I 5 HOH A 95 695 65 HOH HOH . I 5 HOH A 96 696 67 HOH HOH . I 5 HOH A 97 697 100 HOH HOH . I 5 HOH A 98 698 43 HOH HOH . I 5 HOH A 99 699 91 HOH HOH . I 5 HOH A 100 700 89 HOH HOH . I 5 HOH A 101 701 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . H 4 11.957 65.445 17.656 1 74.55 ? C FMT 507 A 1 HETATM 2 O O1 FMT . . . H 4 12.144 65.33 16.444 1 74.28 ? O1 FMT 507 A 1 HETATM 3 O O2 FMT . . . H 4 12.656 66.133 18.399 1 62.82 ? O2 FMT 507 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #